Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.17484
Snca
synuclein, alpha
6
6 29.0 cM
20617
Gene Ontology
cytoplasm
Human Homolog
SNCA[synuclein, alpha (non A4 component of amyloid precursor)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGACTATGCA
CTCACATAAC
(
3
)
19.6
0.0196
Cb medulloblastoma
AGACTATGCA
CTCACATAAC
(
3
)
25.4
0.0254
P8 GC+1d culture
AGACTATGCA
CTCACATAAC
(
3
)
54.8
0.0548
P8 GC+SHH+1d culture
AGACTATGCA
CTCACATAAC
(
3
)
45.7
0.0457
E15 cortex
CTCACATAAC
(
3
)
29.7
0.0297
P1 cortex
AGACTATGCA
CTCACATAAC
(
3
)
40.9
0.0409
Hypothalamus
AGACTATGCA
CTCACATAAC
(
3
)
25.4
0.0254
E12.5 retina
AGACTATGCA
CTCACATAAC
(
3
)
11.3
0.0113
E14.5 retina
AGACTATGCA
10.9
0.0109
E16.5 retina
AGACTATGCA
CTCACATAAC
(
3
)
23.6
0.0236
E18.5 retina
AGACTATGCA
CTCACATAAC
(
3
)
14.5
0.0145
P0.5 retina
AGACTATGCA
CTCACATAAC
(
3
)
23.6
0.0236
P2.5 retina
AGACTATGCA
CTCACATAAC
(
3
)
24.6
0.0246
P4.5 retina
AGACTATGCA
CTCACATAAC
(
3
)
25.8
0.0258
P6.5 retina
AGACTATGCA
CTCACATAAC
(
3
)
21.6
0.0216
P10.5 crx- retina
ACCTTTTCTC
AGACTATGCA
CTCACATAAC
(
3
)
44.6
0.0446
P10.5 crx+ retina
ACCTTTTCTC
AGACTATGCA
CTCACATAAC
(
3
)
11.5
0.0115
Adult retinal
AGACTATGCA
CTCACATAAC
(
3
)
16.7
0.0167
ONL
CTCACATAAC
(
3
)
3.8
0.0038
