Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1761	Clk1	CDC-like kinase 1	1	1 C1.3 (1 30.1 cM)	12747
Gene Ontology	ATP binding | autophosphorylation | nucleus | peptidyl-serine phosphorylation | peptidyl-threonine phosphorylation | peptidyl-tyrosine phosphorylation | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	CLK1[CDC-like kinase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 13 In Situ Hybridization Images

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SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAAGCAGC GCCAAACCAA (2) TTTTTCTCCT 22.8 0.0228 Cb medulloblastoma ACAAATAAAA GCCAAACCAA (2) GGTACCAATT 25.4 0.0254 P8 GC+1d culture CCCCAACCAG GCCAAACCAA (2) GGTACCAATT TTCGGCATCC 15.9 0.0159 P8 GC+SHH+1d culture ACAAATAAAA GCCAAACCAA (2) 9.4 0.0094 3T3 fibroblasts GGCTACGAGC (3) 3.5 0.0035 E15 cortex GAGAAGCAGC GCCAAACCAA (2) 29.6 0.0296 P1 cortex GCCAAACCAA (2) 4.5 0.0045 Hypothalamus GCCAAACCAA (2) TATTTAATAA TTTTTCTCCT 12.6 0.0126 E12.5 retina AGCTTCTCTT (2) GAGAAGCAGC GCCAAACCAA (2) GGTACCAATT 41.4 0.0414 E14.5 retina GCCAAACCAA (2) TATTTAATAA 18.2 0.0182 E16.5 retina GCCAAACCAA (2) GGCTACGAGC (3) GGTACCAATT 29 0.029 E18.5 retina GCCAAACCAA (2) GGCTACGAGC (3) GGTACCAATT 45.4 0.0454 P0.5 retina CCCCAACCAG GCCAAACCAA (2) TTCGGCATCC 23.6 0.0236 P2.5 retina ATAGCAAGGA GCCAAACCAA (2) GGTACCAATT TATTTAATAA 42.4 0.0424 P4.5 retina ACAAATAAAA AGCTTCTCTT (2) GCCAAACCAA (2) TATTTAATAA 43.6 0.0436 P6.5 retina ATAGCAAGGA GCCAAACCAA (2) TTTTTCTCCT 26.7 0.0267 P10.5 crx- retina AGCTTCTCTT (2) GCCAAACCAA (2) 40.9 0.0409 P10.5 crx+ retina ATAGCAAGGA GCCAAACCAA (2) TTCGGCATCC 71.1 0.0711 Adult retinal CCCCAACCAG GAGAAGCAGC GCCAAACCAA (2) 37.1 0.0371 ONL GCCAAACCAA (2) 28.7 0.0287