Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1776	Fth1	ferritin heavy chain 1	19	19 2.0 cM	14319
Gene Ontology	binding | ferric iron binding | iron ion homeostasis | iron ion transport
Human Homolog	FTH1[ferritin, heavy polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 173 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAGGCTGCC 107.7 0.1077 P8 Cb GC AGAGCAAGGA (2) 11.4 0.0114 P8 Cb GC CCAGCTTCAG 6.5 0.0065 P8 Cb GC TCAGCTGCCT (2) 4.9 0.0049 P8 Cb GC TTAAGCTGGC 4.9 0.0049 P8 Cb GC CCGAGAAACT 3.3 0.0033 P8 Cb GC GTGGCGGCGG (2) 1.6 0.0016 P8 Cb GC TCAGGCTGCA 1.6 0.0016 P8 Cb GC TCAGGCTGGC (4) 1.6 0.0016 P8 Cb GC TCGGGCTGCC 1.6 0.0016 P8 Cb GC TTTTCAAATA (2) 1.6 0.0016 Cb medulloblastoma TCAGGCTGCC 339.9 0.3399 Cb medulloblastoma TCAAGCTGCC 11.6 0.0116 Cb medulloblastoma CCGAGAAACT 6.9 0.0069 Cb medulloblastoma TCAGCTGCCT (2) 6.9 0.0069 Cb medulloblastoma CCAGCTTCAG 4.6 0.0046 Cb medulloblastoma TCAGGCTGCG 4.6 0.0046 Cb medulloblastoma TCAGGGTGCC 4.6 0.0046 Cb medulloblastoma AGAGCAAGGA (2) 2.3 0.0023 Cb medulloblastoma CATTTGGAAA 2.3 0.0023 Cb medulloblastoma GAGAACTTTT (2) 2.3 0.0023 Cb medulloblastoma GTGGCGGCGG (2) 2.3 0.0023 Cb medulloblastoma TCAGGCTCCC 2.3 0.0023 Cb medulloblastoma TCAGGTTGCC 2.3 0.0023 Cb medulloblastoma TTAAGCTGGC 2.3 0.0023 Cb medulloblastoma TTTTCAAATA (2) 2.3 0.0023 P8 GC+1d culture TCAGGCTGCC 182.6 0.1826 P8 GC+1d culture AGAGCAAGGA (2) 25.1 0.0251 P8 GC+1d culture GCAGAATATC (2) 3.4 0.0034 P8 GC+1d culture CAAGTCAGGC 1.1 0.0011 P8 GC+1d culture CACGTCAGGC 1.1 0.0011 P8 GC+1d culture CCGAGAAACT 1.1 0.0011 P8 GC+1d culture GCCCATATAG 1.1 0.0011 P8 GC+1d culture TCAGGCCGCC 1.1 0.0011 P8 GC+1d culture TCGGGCTGCC 1.1 0.0011 P8 GC+1d culture TTAAGCTGGC 1.1 0.0011 P8 GC+1d culture TTTTCAAATA (2) 1.1 0.0011 P8 GC+SHH+1d culture TCAGGCTGCC 233 0.233 P8 GC+SHH+1d culture AGAGCAAGGA (2) 22.2 0.0222 P8 GC+SHH+1d culture TCAGGCTGCT 3.5 0.0035 P8 GC+SHH+1d culture GAGAACTTTT (2) 2.3 0.0023 P8 GC+SHH+1d culture CAAGTCAGGC 1.2 0.0012 P8 GC+SHH+1d culture CAATGTAGGC 1.2 0.0012 P8 GC+SHH+1d culture CCAGCTTCAG 1.2 0.0012 P8 GC+SHH+1d culture CCGAGAAACT 1.2 0.0012 P8 GC+SHH+1d culture GCAGAATATC (2) 1.2 0.0012 P8 GC+SHH+1d culture GCAGTCAGGG 1.2 0.0012 P8 GC+SHH+1d culture GTGGCGGCGG (2) 1.2 0.0012 P8 GC+SHH+1d culture TCAGGCCGCC 1.2 0.0012 P8 GC+SHH+1d culture TCAGGCTGCA 1.2 0.0012 P8 GC+SHH+1d culture TCAGGCTGGC (4) 1.2 0.0012 3T3 fibroblasts TCAGGCTGCC 361 0.361 3T3 fibroblasts CCAGCTTCAG 21 0.021 3T3 fibroblasts CCGAGAAACT 7 0.007 3T3 fibroblasts CACGTCAGGC 3.5 0.0035 3T3 fibroblasts TCAGCTGCCT (2) 3.5 0.0035 3T3 fibroblasts TCAGCTGCTT 3.5 0.0035 3T3 fibroblasts TCGGGCTGCC 3.5 0.0035 E15 cortex TCAGGCTGCC 84.1 0.0841 E15 cortex AGAGCAAGGA (2) 9.9 0.0099 E15 cortex TTAAGCTGGC 9.9 0.0099 E15 cortex CATTTGGAAA 4.9 0.0049 E15 cortex TCAAGCTGCC 4.9 0.0049 E15 cortex TCAGCTGCCT (2) 4.9 0.0049 P1 cortex TCAGGCTGCC 54.5 0.0545 P1 cortex AGAGCAAGGA (2) 22.7 0.0227 P1 cortex TCAGCTGCCT (2) 4.5 0.0045 Hypothalamus TCAGGCTGCC 490.8 0.4908 Hypothalamus CCAGCTTCAG 23.5 0.0235 Hypothalamus GCAGAATATC (2) 16.3 0.0163 Hypothalamus AGAGCAAGGA (2) 14.5 0.0145 Hypothalamus GTGGCGGCGG (2) 7.2 0.0072 Hypothalamus CCGAGAAACT 5.4 0.0054 Hypothalamus TCAGCTGCCT (2) 3.6 0.0036 Hypothalamus TCAGGCCTGC 3.6 0.0036 Hypothalamus TTAAGCTGGC 3.6 0.0036 Hypothalamus CACGTCAGGC 1.8 0.0018 Hypothalamus CACTGCCTCA 1.8 0.0018 Hypothalamus CATTTGGAAA 1.8 0.0018 Hypothalamus TCAGGCCGCC 1.8 0.0018 Hypothalamus TCAGGCTGCA 1.8 0.0018 Hypothalamus TCAGGCTGCT 1.8 0.0018 Hypothalamus TCAGGTTGCC 1.8 0.0018 E12.5 retina TCAGGCTGCC 82.6 0.0826 E12.5 retina CATTTGGAAA 1.9 0.0019 E12.5 retina CCAGCTTCAG 1.9 0.0019 E12.5 retina GCAGAATATC (2) 1.9 0.0019 E12.5 retina TCAGCTGCTT 1.9 0.0019 E12.5 retina TTAAGCTGGC 1.9 0.0019 E14.5 retina TCAGGCTGCC 85.6 0.0856 E14.5 retina AGAGCAAGGA (2) 9.1 0.0091 E16.5 retina TCAGGCTGCC 103.2 0.1032 E16.5 retina AGAGCAAGGA (2) 9.1 0.0091 E16.5 retina GTGGCGGCGG (2) 9.1 0.0091 E16.5 retina GCAGAATATC (2) 5.4 0.0054 E16.5 retina CCAGCTTCAG 3.6 0.0036 E16.5 retina CCGAGAAACT 3.6 0.0036 E16.5 retina GCCCATATAG 1.8 0.0018 E16.5 retina TCGGGCTGCC 1.8 0.0018 E18.5 retina TCAGGCTGCC 69.1 0.0691 E18.5 retina AGAGCAAGGA (2) 5.5 0.0055 E18.5 retina CCAGCTTCAG 3.6 0.0036 E18.5 retina CATTTGGAAA 1.8 0.0018 E18.5 retina CCGAGAAACT 1.8 0.0018 E18.5 retina GAGAACTTTT (2) 1.8 0.0018 E18.5 retina GCAGTCAGGG 1.8 0.0018 E18.5 retina GTGGCGGCGG (2) 1.8 0.0018 E18.5 retina TCAGGCTGCA 1.8 0.0018 E18.5 retina TCAGGTTGCC 1.8 0.0018 P0.5 retina TCAGGCTGCC 66.7 0.0667 P0.5 retina CATTTGGAAA 3.9 0.0039 P0.5 retina CCAGCTTCAG 3.9 0.0039 P0.5 retina CAATGTAGGC 2 0.002 P0.5 retina TCAGCTGCCT (2) 2 0.002 P0.5 retina TCAGCTGCTT 2 0.002 P0.5 retina TCAGGGTGCC 2 0.002 P0.5 retina TTAAGCTGGC 2 0.002 P2.5 retina TCAGGCTGCC 80.9 0.0809 P2.5 retina AGAGCAAGGA (2) 8.8 0.0088 P2.5 retina CATTTGGAAA 1.8 0.0018 P2.5 retina GCAGTCAGGG 1.8 0.0018 P2.5 retina GCCCATATAG 1.8 0.0018 P2.5 retina GTGGCGGCGG (2) 1.8 0.0018 P2.5 retina TCAAGCTGCC 1.8 0.0018 P2.5 retina TCAGGCTCCC 1.8 0.0018 P2.5 retina TCAGGCTGCG 1.8 0.0018 P2.5 retina TCAGGCTGCT 1.8 0.0018 P4.5 retina TCAGGCTGCC 95.1 0.0951 P4.5 retina AGAGCAAGGA (2) 11.9 0.0119 P4.5 retina GCAGTCAGGG 4 0.004 P4.5 retina CCAGCTTCAG 2 0.002 P4.5 retina GAGAACTTTT (2) 2 0.002 P4.5 retina GGTCCAGGAG 2 0.002 P4.5 retina TCAGGCTGCT 2 0.002 P4.5 retina TCGGGCTGCC 2 0.002 P4.5 retina TTTTCAAATA (2) 2 0.002 P6.5 retina TCAGGCTGCC 133.4 0.1334 P6.5 retina AGAGCAAGGA (2) 10 0.01 P6.5 retina TTAAGCTGGC 5 0.005 P6.5 retina GAGAACTTTT (2) 1.7 0.0017 P6.5 retina TCAAGCTGCC 1.7 0.0017 P6.5 retina TTTTCAAATA (2) 1.7 0.0017 P10.5 crx- retina TCAGGCTGCC 157.9 0.1579 P10.5 crx- retina AGAGCAAGGA (2) 3.7 0.0037 P10.5 crx- retina CCGAGAAACT 3.7 0.0037 P10.5 crx- retina CAATGTAGGC 1.9 0.0019 P10.5 crx- retina CACTGCCTCA 1.9 0.0019 P10.5 crx- retina CCAGCTTCAG 1.9 0.0019 P10.5 crx- retina GCAGTCAGGG 1.9 0.0019 P10.5 crx- retina GCCCATATAG 1.9 0.0019 P10.5 crx- retina TCAGGCTGCT 1.9 0.0019 P10.5 crx- retina TCAGGCTGGC (4) 1.9 0.0019 P10.5 crx+ retina TCAGGCTGCC 196.1 0.1961 P10.5 crx+ retina AGAGCAAGGA (2) 9.6 0.0096 P10.5 crx+ retina CCGAGAAACT 3.8 0.0038 P10.5 crx+ retina GTGGCGGCGG (2) 3.8 0.0038 P10.5 crx+ retina TCAAGCTGCC 3.8 0.0038 P10.5 crx+ retina CAATGTAGGC 1.9 0.0019 P10.5 crx+ retina CCAGCTTCAG 1.9 0.0019 P10.5 crx+ retina GAGAACTTTT (2) 1.9 0.0019 P10.5 crx+ retina TTTTCAAATA (2) 1.9 0.0019 Adult retinal TCAGGCTGCC 75.9 0.0759 Adult retinal AGAGCAAGGA (2) 3.7 0.0037 Adult retinal CAATGTAGGC 3.7 0.0037 Adult retinal CCAGCTTCAG 3.7 0.0037 Adult retinal GGTCCAGGAG 3.7 0.0037 Adult retinal CACGTCAGGC 1.9 0.0019 Adult retinal TCAGGCCGCC 1.9 0.0019 Adult retinal TCAGGCCTGC 1.9 0.0019 Adult retinal TCAGGCTGCT 1.9 0.0019 ONL TCAGGCTGCC 78.5 0.0785 ONL CAATGTAGGC 3.8 0.0038 ONL TCAGGCTCCC 1.9 0.0019