Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1776	Fth1	ferritin heavy chain 1	19	19 2.0 cM	14319
Gene Ontology	binding | ferric iron binding | iron ion homeostasis | iron ion transport
Human Homolog	FTH1[ferritin, heavy polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 300 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGCAAGGA (2) CACTAGTACA CCAGCTTCAG CCGAGAAACT CTTTTGATAC (6) GAAGAGGTGG (3) GCACAAAAAA GGAAAAAAAA (2) GTGGCGGCGG (2) TCAGCTGCCT (2) TCAGGCTGCA TCAGGCTGCC TCAGGCTGGC (4) TCGGGCTGCC TTAAGCTGGC TTTTCAAATA (2) 166.4 0.1664 Cb medulloblastoma AACACAATGG AATATGCGTG AGAGCAAGGA (2) CACTAGTACA CATTTGGAAA CCAGCCTTCA (4) CCAGCTTCAG CCGAGAAACT GAAGAGGTGG (3) GAGAACTTTT (2) GCACTGGAAA GGAAAAAAAA (2) GGGGTTGCCC GTGGCGGCGG (2) TCAAGCTGCC TCAGCTGCCT (2) TCAGGCTCCC TCAGGCTGCC TCAGGCTGCG TCAGGGTGCC TCAGGTTGCC TTAAGCTGGC TTTTCAAATA (2) 455.2 0.4552 P8 GC+1d culture AATATGCGTG AGAGCAAGGA (2) CAAGTCAGGC CACGTCAGGC CACTAGTACA CCAAATAATC CCAGCCTTCA (4) CCGAGAAACT CTTTTGATAC (6) GAAGAGGTGG (3) GCACAAAAAA GCAGAATATC (2) GCCCATATAG GGAAAAAAAA (2) GGGGTTGCCC TCAGGCCGCC TCAGGCTGCC TCGGGCTGCC TGAAAGAAGT TTAAGCTGGC TTTTCAAATA (2) TTTTTTTTTA 241.3 0.2413 P8 GC+SHH+1d culture AATATGCGTG AGAGCAAGGA (2) CAAGTCAGGC CAATGTAGGC CCAGCCTTCA (4) CCAGCTTCAG CCGAGAAACT CCTTCAAATT (3) CTTTTGATAC (6) GAAGAGGTGG (3) GACTGCCTCA GAGAACTTTT (2) GCAGAATATC (2) GCAGTCAGGG GGAAAAAAAA (2) GTGGCGGCGG (2) TCAGGCCGCC TCAGGCTGCA TCAGGCTGCC TCAGGCTGCT TCAGGCTGGC (4) TGAAAGAAGT 296.4 0.2964 3T3 fibroblasts CACGTCAGGC CCAGCTTCAG CCGAGAAACT GACTGCCTCA TCAGCTGCCT (2) TCAGCTGCTT TCAGGCTGCC TCGGGCTGCC TGCAGGCTGG (2) 424 0.424 E15 cortex AGAGCAAGGA (2) CATTTGGAAA CCAAATAATC GCCCCGGGAA GGAAAAAAAA (2) TCAAGCTGCC TCAGCTGCCT (2) TCAGGCTGCC TGAAAGAAGT TTAAGCTGGC 143.2 0.1432 P1 cortex AGAGCAAGGA (2) CTTTTGATAC (6) GAAAAATAAT GGAAAAAAAA (2) TCAGCTGCCT (2) TCAGGCTGCC TTTTTTTTTA 104.3 0.1043 Hypothalamus AATATGCGTG AGAGCAAGGA (2) CACGTCAGGC CACTAGTACA CACTGCCTCA CATTTGGAAA CCAGCCTTCA (4) CCAGCTTCAG CCGAGAAACT CCTTCAAATT (3) CTTTGTCAGG GAAGAGGTGG (3) GCAGAATATC (2) GCCCCGGGAA GGAAAAAAAA (2) GGGGGGGTTG GGGGTTGCCC GTGGCGGCGG (2) TCAGCTGCCT (2) TCAGGCCGCC TCAGGCCTGC TCAGGCTGCA TCAGGCTGCC TCAGGCTGCT TCAGGTTGCC TGAAAGAAGT TTAAGCTGGC 637.1 0.6371 E12.5 retina CATTTGGAAA CCAGCCTTCA (4) CCAGCTTCAG CTTTGTCAGG GAAGAGGTGG (3) GACTGCCTCA GCAGAATATC (2) GGAAAAAAAA (2) TCAGCTGCTT TCAGGCTGCC TTAAGCTGGC 105.4 0.1054 E14.5 retina AGAGCAAGGA (2) CCAGCCTTCA (4) GAAGAGGTGG (3) GCACAAAAAA GCACTGGAAA GCCCCGGGAA GGAAAAAAAA (2) TCAGGCTGCC 116.4 0.1164 E16.5 retina AGAGCAAGGA (2) CCAGCCTTCA (4) CCAGCTTCAG CCGAGAAACT CTTTTGATAC (6) GAAGAGGTGG (3) GCAGAATATC (2) GCCCATATAG GCCTTGGGCT GGAAAAAAAA (2) GGGGTTGCCC GTGGCGGCGG (2) TCAGGCTGCC TCGGGCTGCC 148.4 0.1484 E18.5 retina AACACAATGG AGAGCAAGGA (2) CATTTGGAAA CCAGCCTTCA (4) CCAGCTTCAG CCGAGAAACT CCTTCAAATT (3) GACTGCCTCA GAGAACTTTT (2) GCAGTCAGGG GCCCCGGGAA GGAAAAAAAA (2) GTGGCGGCGG (2) TCAGGCTGCA TCAGGCTGCC TCAGGTTGCC 121.7 0.1217 P0.5 retina CAATGTAGGC CACTAGTACA CATTTGGAAA CCAGCCTTCA (4) CCAGCTTCAG GAAAAATAAT GAAGAGGTGG (3) GACTGCCTCA GCACAAAAAA GCCCCGGGAA GGAAAAAAAA (2) TCAGCTGCCT (2) TCAGCTGCTT TCAGGCTGCC TCAGGGTGCC TGAAAGAAGT TTAAGCTGGC 120 0.12 P2.5 retina AGAGCAAGGA (2) CATTTGGAAA CCAGCCTTCA (4) CTTTTGATAC (6) GACTGCCTCA GCAGTCAGGG GCCCATATAG GCCCCGGGAA GGAAAAAAAA (2) GTGGCGGCGG (2) TCAAGCTGCC TCAGGCTCCC TCAGGCTGCC TCAGGCTGCG TCAGGCTGCT TCCGGCTGCC TGAAAGAAGT TTTTTTTTTA 127.1 0.1271 P4.5 retina AGAGCAAGGA (2) CCAGCCTTCA (4) CCAGCTTCAG GAGAACTTTT (2) GCACTGGAAA GCAGTCAGGG GCCCCGGGAA GGAAAAAAAA (2) GGTCCAGGAG TCAGGCTGCC TCAGGCTGCT TCGGGCTGCC TGCAGGCTGG (2) TTTTCAAATA (2) 152.8 0.1528 P6.5 retina AGAGCAAGGA (2) CACTAGTACA CCAAATAATC CCAGCCTTCA (4) CTTTGTCAGG GAGAACTTTT (2) GCACAAAAAA GCCCCGGGAA GCCTTGGGCT GGAAAAAAAA (2) GGCAAAAATT TCAAGCTGCC TCAGGCTGCC TTAAGCTGGC TTTTCAAATA (2) 200.2 0.2002 P10.5 crx- retina AACACAATGG AGAGCAAGGA (2) CAATGTAGGC CACTGCCTCA CCAGCCTTCA (4) CCAGCTTCAG CCGAGAAACT GAAGAGGTGG (3) GCACAAAAAA GCAGTCAGGG GCCCATATAG GCCCCGGGAA GGAAAAAAAA (2) TCAGGCTGCC TCAGGCTGCT TCAGGCTGGC (4) 191.8 0.1918 P10.5 crx+ retina AATATGCGTG AGAGCAAGGA (2) CAATGTAGGC CCAGCCTTCA (4) CCAGCTTCAG CCGAGAAACT GAGAACTTTT (2) GCCCCGGGAA GCCTTGGGCT GGAAAAAAAA (2) GTGGCGGCGG (2) TCAAGCTGCC TCAGGCTGCC TTTTCAAATA (2) 249.6 0.2496 Adult retinal AGAGCAAGGA (2) CAATGTAGGC CACGTCAGGC CCAGCCTTCA (4) CCAGCTTCAG CTTTTGATAC (6) GCCCCGGGAA GGAAAAAAAA (2) GGTCCAGGAG TCAGGCCGCC TCAGGCCTGC TCAGGCTGCC TCAGGCTGCT TCCGGCTGCC TGAAAGAAGT 115.2 0.1152 ONL CAATGTAGGC GCACAAAAAA GGAAAAAAAA (2) TCAGGCTCCC TCAGGCTGCC TCCGGCTGCC 105.2 0.1052