Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.178818	D8Ertd325e	DNA segment, Chr 8, ERATO Doi 325, expressed	8	8 67.0 cM	66855
Gene Ontology	biological_process unknown | molecular_function unknown | nucleus
Human Homolog	KIAA1049[KIAA1049 protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 216 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AGGAAGATCA (4) 31 0.031 P8 Cb GC GACTGCAGTG (2) 24.5 0.0245 P8 Cb GC CCAAAAAAAA (35) 22.8 0.0228 P8 Cb GC TAGTCAGGGA 21.2 0.0212 P8 Cb GC GCCAAAAAAA (23) 6.5 0.0065 P8 Cb GC GGATGTCTCT (2) 3.3 0.0033 P8 Cb GC TTGCTGCCTT (10) 3.3 0.0033 P8 Cb GC GGAGGCAGAG (9) 1.6 0.0016 P8 Cb GC TTGTGCTTAT (5) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCAAAAAAAA (35) 90.2 0.0902 Cb medulloblastoma TAGTCAGGGA 67.1 0.0671 Cb medulloblastoma GCCAAAAAAA (23) 9.2 0.0092 Cb medulloblastoma AAAATGCACA 2.3 0.0023 Cb medulloblastoma AGGGGCCTAG (2) 2.3 0.0023 Cb medulloblastoma GAAACGCAGA 2.3 0.0023 Cb medulloblastoma GACTGCAGTG (2) 2.3 0.0023 Cb medulloblastoma GCCAAGCAGA (4) 2.3 0.0023 Cb medulloblastoma GGAGGCAGAG (9) 2.3 0.0023 Cb medulloblastoma GGGAAGGTGG (6) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TAGTCAGGGA 47.9 0.0479 P8 GC+1d culture CCAAAAAAAA (35) 38.8 0.0388 P8 GC+1d culture GACTGCAGTG (2) 24 0.024 P8 GC+1d culture TTGCTGCCTT (10) 14.8 0.0148 P8 GC+1d culture AGGAAGATCA (4) 10.3 0.0103 P8 GC+1d culture GCCAAAAAAA (23) 8 0.008 P8 GC+1d culture CTCTAGGAAC 2.3 0.0023 P8 GC+1d culture GGAGGCAGAG (9) 1.1 0.0011 P8 GC+1d culture GGGAAGGTGG (6) 1.1 0.0011 P8 GC+1d culture TTGTGCTTAT (5) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TAGTCAGGGA 44.5 0.0445 P8 GC+SHH+1d culture CCAAAAAAAA (35) 39.8 0.0398 P8 GC+SHH+1d culture AGGAAGATCA (4) 22.2 0.0222 P8 GC+SHH+1d culture GACTGCAGTG (2) 19.9 0.0199 P8 GC+SHH+1d culture GCCAAAAAAA (23) 10.5 0.0105 P8 GC+SHH+1d culture TTGCTGCCTT (10) 9.4 0.0094 P8 GC+SHH+1d culture GGATGTCTCT (2) 2.3 0.0023 P8 GC+SHH+1d culture CAGGTTAGGT (2) 1.2 0.0012 P8 GC+SHH+1d culture CTCTAGGAAC 1.2 0.0012 P8 GC+SHH+1d culture GGAGCCCAAT (2) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAGGTGG (6) 1.2 0.0012 P8 GC+SHH+1d culture GTGATATGGC (2) 1.2 0.0012 3T3 fibroblasts GACTGCAGTG (2) 42.1 0.0421 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts AGGAAGATCA (4) 7 0.007 3T3 fibroblasts TTGCTGCCTT (10) 7 0.007 3T3 fibroblasts AGGGGCCTAG (2) 3.5 0.0035 3T3 fibroblasts GAAACGCAGA 3.5 0.0035 3T3 fibroblasts GGAGGCAGAG (9) 3.5 0.0035 3T3 fibroblasts GGATGTCTCT (2) 3.5 0.0035 3T3 fibroblasts GGGAAGGTGG (6) 3.5 0.0035 3T3 fibroblasts TAGTCAGGGA 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GAAACGCAGA 24.7 0.0247 E15 cortex GACTGCAGTG (2) 24.7 0.0247 E15 cortex AGGAAGATCA (4) 9.9 0.0099 E15 cortex CCAAAAAAAA (35) 9.9 0.0099 E15 cortex TTGCTGCCTT (10) 9.9 0.0099 E15 cortex CTCTAGGAAC 4.9 0.0049 E15 cortex GCCAAAAAAA (23) 4.9 0.0049 E15 cortex GGAGGCAGAG (9) 4.9 0.0049 E15 cortex TAGTCAGGGA 4.9 0.0049 E15 cortex TCTGCTGCTG (6) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCAAAAAAAA (35) 40.9 0.0409 P1 cortex AGGGGCCTAG (2) 18.2 0.0182 P1 cortex TAGTCAGGGA 18.2 0.0182 P1 cortex GACTGCAGTG (2) 13.6 0.0136 P1 cortex GCCAAAAAAA (23) 9.1 0.0091 P1 cortex GCCAAGCAGA (4) 4.5 0.0045 P1 cortex TTGCTGCCTT (10) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TAGTCAGGGA 61.6 0.0616 Hypothalamus CCAAAAAAAA (35) 38 0.038 Hypothalamus GCCAAAAAAA (23) 10.9 0.0109 Hypothalamus TTCAAGGGAG 9.1 0.0091 Hypothalamus GACTGCAGTG (2) 7.2 0.0072 Hypothalamus GGAGGCAGAG (9) 7.2 0.0072 Hypothalamus GTGATATGGC (2) 7.2 0.0072 Hypothalamus TTGCTGCCTT (10) 5.4 0.0054 Hypothalamus AAAATGCACA 3.6 0.0036 Hypothalamus CTCTAGGAAC 1.8 0.0018 Hypothalamus GGAGCCCAAT (2) 1.8 0.0018 Hypothalamus GGGAAGGTGG (6) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TAGTCAGGGA 43.2 0.0432 E12.5 retina CCAAAAAAAA (35) 16.9 0.0169 E12.5 retina GACTGCAGTG (2) 15 0.015 E12.5 retina AGGAAGATCA (4) 11.3 0.0113 E12.5 retina GTGATATGGC (2) 5.6 0.0056 E12.5 retina CTCTAGGAAC 3.8 0.0038 E12.5 retina GGAGGCAGAG (9) 3.8 0.0038 E12.5 retina TTGCTGCCTT (10) 3.8 0.0038 E12.5 retina TTGTGCTTAT (5) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TAGTCAGGGA 21.9 0.0219 E14.5 retina CCAAAAAAAA (35) 18.2 0.0182 E14.5 retina GGAGGCAGAG (9) 14.6 0.0146 E14.5 retina TTGCTGCCTT (10) 10.9 0.0109 E14.5 retina AGGAAGATCA (4) 9.1 0.0091 E14.5 retina GCCAAAAAAA (23) 9.1 0.0091 E14.5 retina TCTGCTGCTG (6) 3.6 0.0036 E14.5 retina AAAATGCACA 1.8 0.0018 E14.5 retina CTCTAGGAAC 1.8 0.0018 E14.5 retina GACTGCAGTG (2) 1.8 0.0018 E14.5 retina TTGTGCTTAT (5) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TAGTCAGGGA 39.8 0.0398 E16.5 retina CCAAAAAAAA (35) 16.3 0.0163 E16.5 retina AGGAAGATCA (4) 14.5 0.0145 E16.5 retina GACTGCAGTG (2) 12.7 0.0127 E16.5 retina TTGCTGCCTT (10) 12.7 0.0127 E16.5 retina GCCAAAAAAA (23) 9.1 0.0091 E16.5 retina CAGGTTAGGT (2) 3.6 0.0036 E16.5 retina AAAATGCACA 1.8 0.0018 E16.5 retina GGAGGCAGAG (9) 1.8 0.0018 E16.5 retina GGGAAGGTGG (6) 1.8 0.0018 E16.5 retina TTCAAGGGAG 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CCAAAAAAAA (35) 38.2 0.0382 E18.5 retina TAGTCAGGGA 36.4 0.0364 E18.5 retina GCCAAAAAAA (23) 25.5 0.0255 E18.5 retina AGGAAGATCA (4) 9.1 0.0091 E18.5 retina TTGCTGCCTT (10) 9.1 0.0091 E18.5 retina GACTGCAGTG (2) 3.6 0.0036 E18.5 retina GGAGGCAGAG (9) 1.8 0.0018 E18.5 retina GTGATATGGC (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCAAAAAAAA (35) 29.4 0.0294 P0.5 retina AGGAAGATCA (4) 23.6 0.0236 P0.5 retina TAGTCAGGGA 23.6 0.0236 P0.5 retina GACTGCAGTG (2) 11.8 0.0118 P0.5 retina GGGAAGGTGG (6) 3.9 0.0039 P0.5 retina GTGATATGGC (2) 3.9 0.0039 P0.5 retina TTGCTGCCTT (10) 3.9 0.0039 P0.5 retina GCCAAAAAAA (23) 2 0.002 P0.5 retina GGAGGCAGAG (9) 2 0.002 P0.5 retina TTGTGCTTAT (5) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TAGTCAGGGA 56.3 0.0563 P2.5 retina CCAAAAAAAA (35) 44 0.044 P2.5 retina AGGAAGATCA (4) 12.3 0.0123 P2.5 retina TTGCTGCCTT (10) 10.6 0.0106 P2.5 retina GCCAAAAAAA (23) 8.8 0.0088 P2.5 retina GACTGCAGTG (2) 7 0.007 P2.5 retina GGAGGCAGAG (9) 7 0.007 P2.5 retina AGGGGCCTAG (2) 3.5 0.0035 P2.5 retina GGGAAGGTGG (6) 3.5 0.0035 P2.5 retina CTCTAGGAAC 1.8 0.0018 P2.5 retina GAAACGCAGA 1.8 0.0018 P2.5 retina TTCAAGGGAG 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TAGTCAGGGA 59.4 0.0594 P4.5 retina CCAAAAAAAA (35) 39.6 0.0396 P4.5 retina TTGCTGCCTT (10) 21.8 0.0218 P4.5 retina GCCAAAAAAA (23) 11.9 0.0119 P4.5 retina AGGAAGATCA (4) 9.9 0.0099 P4.5 retina GGAGGCAGAG (9) 5.9 0.0059 P4.5 retina GACTGCAGTG (2) 4 0.004 P4.5 retina GAAACGCAGA 2 0.002 P4.5 retina TTGTGCTTAT (5) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TAGTCAGGGA 46.7 0.0467 P6.5 retina CCAAAAAAAA (35) 38.3 0.0383 P6.5 retina GCCAAAAAAA (23) 11.7 0.0117 P6.5 retina TTGCTGCCTT (10) 8.3 0.0083 P6.5 retina GACTGCAGTG (2) 6.7 0.0067 P6.5 retina AAAATGCACA 5 0.005 P6.5 retina GGAGGCAGAG (9) 5 0.005 P6.5 retina GGGAAGGTGG (6) 1.7 0.0017 P6.5 retina GTGATATGGC (2) 1.7 0.0017 P6.5 retina TTCAAGGGAG 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CCAAAAAAAA (35) 14.9 0.0149 P10.5 crx- retina TAGTCAGGGA 13 0.013 P10.5 crx- retina GCCAAAAAAA (23) 9.3 0.0093 P10.5 crx- retina GACTGCAGTG (2) 7.4 0.0074 P10.5 crx- retina GCCAAGCAGA (4) 1.9 0.0019 P10.5 crx- retina GGGAAGGTGG (6) 1.9 0.0019 P10.5 crx- retina TTGCTGCCTT (10) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TAGTCAGGGA 59.6 0.0596 P10.5 crx+ retina CCAAAAAAAA (35) 38.4 0.0384 P10.5 crx+ retina GACTGCAGTG (2) 26.9 0.0269 P10.5 crx+ retina GCCAAAAAAA (23) 17.3 0.0173 P10.5 crx+ retina TTGCTGCCTT (10) 11.5 0.0115 P10.5 crx+ retina GGAGGCAGAG (9) 9.6 0.0096 P10.5 crx+ retina GTGATATGGC (2) 3.8 0.0038 P10.5 crx+ retina TTGTGCTTAT (5) 3.8 0.0038 P10.5 crx+ retina AAAATGCACA 1.9 0.0019 P10.5 crx+ retina CAGGTTAGGT (2) 1.9 0.0019 P10.5 crx+ retina CTCTAGGAAC 1.9 0.0019 P10.5 crx+ retina GCCAAGCAGA (4) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TAGTCAGGGA 38.9 0.0389 Adult retinal CCAAAAAAAA (35) 35.2 0.0352 Adult retinal GCCAAAAAAA (23) 7.4 0.0074 Adult retinal GACTGCAGTG (2) 5.6 0.0056 Adult retinal GGAGGCAGAG (9) 5.6 0.0056 Adult retinal CTCTAGGAAC 3.7 0.0037 Adult retinal TTGCTGCCTT (10) 3.7 0.0037 Adult retinal GTGATATGGC (2) 1.9 0.0019 Adult retinal TTCAAGGGAG 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL TAGTCAGGGA 23 0.023 ONL CCAAAAAAAA (35) 7.7 0.0077 ONL GACTGCAGTG (2) 7.7 0.0077 ONL TTGCTGCCTT (10) 7.7 0.0077 ONL GGAGGCAGAG (9) 5.7 0.0057 ONL GCCAAAAAAA (23) 3.8 0.0038 ONL CAGGTTAGGT (2) 1.9 0.0019 ONL GGGAAGGTGG (6) 1.9 0.0019 ONL GTGATATGGC (2) 1.9 0.0019