Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.180003	Rps27a	ribosomal protein S27a	9		78294
Gene Ontology	intracellular | nucleus | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPS27A[ribosomal protein S27a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAGCCACT 347.5 0.3475 P8 Cb GC AAAACTCCAG 6.5 0.0065 P8 Cb GC GAAAGCCACT 1.6 0.0016 P8 Cb GC GAAGCCACTT (2) 1.6 0.0016 P8 Cb GC GGAAGCCCCT (2) 1.6 0.0016 Cb medulloblastoma GGAAGCCACT 173.4 0.1734 Cb medulloblastoma AAAACTCCAG 6.9 0.0069 P8 GC+1d culture GGAAGCCACT 172.4 0.1724 P8 GC+1d culture GAAGCCACTT (2) 2.3 0.0023 P8 GC+1d culture AAAACTCCAG 1.1 0.0011 P8 GC+1d culture GAAAGCCACT 1.1 0.0011 P8 GC+SHH+1d culture GGAAGCCACT 237.7 0.2377 P8 GC+SHH+1d culture GAAGCCACTT (2) 2.3 0.0023 P8 GC+SHH+1d culture GAAAGCCACT 1.2 0.0012 3T3 fibroblasts GGAAGCCACT 143.7 0.1437 3T3 fibroblasts AAAACTCCAG 3.5 0.0035 E15 cortex GGAAGCCACT 148.4 0.1484 P1 cortex GGAAGCCACT 45.5 0.0455 P1 cortex AAAACTCCAG 9.1 0.0091 P1 cortex GAAAGCCACT 4.5 0.0045 P1 cortex GGAAGCCCCT (2) 4.5 0.0045 Hypothalamus GGAAGCCACT 148.5 0.1485 Hypothalamus AAAACTCCAG 5.4 0.0054 Hypothalamus GAAGCCACTT (2) 3.6 0.0036 E12.5 retina GGAAGCCACT 276 0.276 E12.5 retina GAAGCCACTT (2) 5.6 0.0056 E12.5 retina AAAACTCCAG 3.8 0.0038 E12.5 retina GGAAGCCCCT (2) 1.9 0.0019 E14.5 retina GGAAGCCACT 165.8 0.1658 E14.5 retina AAAACTCCAG 9.1 0.0091 E16.5 retina GGAAGCCACT 211.9 0.2119 E16.5 retina AAAACTCCAG 10.9 0.0109 E16.5 retina GGAAGCCCCT (2) 3.6 0.0036 E18.5 retina GGAAGCCACT 247.4 0.2474 E18.5 retina AAAACTCCAG 14.6 0.0146 E18.5 retina GGAAGCCCCT (2) 5.5 0.0055 E18.5 retina GAAGCCACTT (2) 3.6 0.0036 P0.5 retina GGAAGCCACT 225.7 0.2257 P0.5 retina GAAGCCACTT (2) 2 0.002 P2.5 retina GGAAGCCACT 212.9 0.2129 P2.5 retina AAAACTCCAG 3.5 0.0035 P4.5 retina GGAAGCCACT 164.5 0.1645 P4.5 retina AAAACTCCAG 5.9 0.0059 P4.5 retina GAAGCCACTT (2) 4 0.004 P4.5 retina GGAAGCCCCT (2) 2 0.002 P6.5 retina GGAAGCCACT 81.7 0.0817 P6.5 retina GAAAGCCACT 1.7 0.0017 P10.5 crx- retina GGAAGCCACT 183.9 0.1839 P10.5 crx- retina AAAACTCCAG 3.7 0.0037 P10.5 crx- retina GGAAGCCCCT (2) 1.9 0.0019 P10.5 crx+ retina GGAAGCCACT 132.7 0.1327 P10.5 crx+ retina GAAGCCACTT (2) 1.9 0.0019 Adult retinal GGAAGCCACT 96.3 0.0963 Adult retinal GGAAGCCCCT (2) 1.9 0.0019 ONL GGAAGCCACT 59.4 0.0594