Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.180052	Ube2d2	ubiquitin-conjugating enzyme E2D 2	18		56550
Gene Ontology	ligase activity | protein binding | protein modification | ubiquitin conjugating enzyme activity | ubiquitin cycle | ubiquitin-dependent protein catabolism | ubiquitin-protein ligase activity
Human Homolog	UBE2D2[ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 115 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGTTTCTG (4) 24.5 0.0245 P8 Cb GC CTGTGCTTTA (3) 4.9 0.0049 P8 Cb GC AATGTTTTTG (4) 1.6 0.0016 P8 Cb GC AGACCAGCCT (3) 1.6 0.0016 P8 Cb GC ATAAAAGTCT 1.6 0.0016 P8 Cb GC GTTTTTTTTT (16) 1.6 0.0016 P8 Cb GC TGAACTAGGC 1.6 0.0016 Cb medulloblastoma AATGTTTCTG (4) 6.9 0.0069 Cb medulloblastoma ATTTTGAAAT (2) 4.6 0.0046 Cb medulloblastoma GTTTTTTTTT (16) 4.6 0.0046 Cb medulloblastoma AGCACAATCT (3) 2.3 0.0023 Cb medulloblastoma CTGTGCTTTA (3) 2.3 0.0023 Cb medulloblastoma GCTGTGCTTT (4) 2.3 0.0023 Cb medulloblastoma TGAACTAGGC 2.3 0.0023 P8 GC+1d culture TGAACTAGGC 6.8 0.0068 P8 GC+1d culture TTTACCTGAC (3) 2.3 0.0023 P8 GC+1d culture AATGTTTCTG (4) 1.1 0.0011 P8 GC+1d culture AGCACAATCT (3) 1.1 0.0011 P8 GC+1d culture CTGTGCTTTA (3) 1.1 0.0011 P8 GC+1d culture GTTTTTTTTT (16) 1.1 0.0011 P8 GC+SHH+1d culture AATGTTTCTG (4) 16.4 0.0164 P8 GC+SHH+1d culture TGAACTAGGC 7 0.007 P8 GC+SHH+1d culture CTGTGCTTTA (3) 5.9 0.0059 P8 GC+SHH+1d culture ACTGTTAAAC 4.7 0.0047 P8 GC+SHH+1d culture GCTCTGAAGA (5) 1.2 0.0012 P8 GC+SHH+1d culture GCTGTGCTTT (4) 1.2 0.0012 P8 GC+SHH+1d culture GTTTTTTTTT (16) 1.2 0.0012 P8 GC+SHH+1d culture TAGTTTAATC 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts AATGTTTCTG (4) 7 0.007 3T3 fibroblasts CTGTGCTTTA (3) 3.5 0.0035 E15 cortex AATGTTTCTG (4) 9.9 0.0099 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex AATGTTTCTG (4) 4.5 0.0045 P1 cortex ACTGTTAAAC 4.5 0.0045 P1 cortex TTTCCCAGGT (2) 4.5 0.0045 Hypothalamus TGAACTAGGC 5.4 0.0054 Hypothalamus GTGCAGGTGT (4) 3.6 0.0036 Hypothalamus TTTCCCAGGT (2) 3.6 0.0036 Hypothalamus AATGTTTCTG (4) 1.8 0.0018 Hypothalamus CTGTGCTTTA (3) 1.8 0.0018 Hypothalamus TTTACCTGAC (3) 1.8 0.0018 E12.5 retina AATGTTTCTG (4) 28.2 0.0282 E12.5 retina CTGTGCTTTA (3) 7.5 0.0075 E12.5 retina TGAACTAGGC 5.6 0.0056 E12.5 retina ACTGTTAAAC 3.8 0.0038 E12.5 retina GCTGTGCTTT (4) 1.9 0.0019 E14.5 retina AATGTTTCTG (4) 27.3 0.0273 E14.5 retina ATAAAAGTCT 7.3 0.0073 E14.5 retina ACTGTTAAAC 3.6 0.0036 E14.5 retina CTGTGCTTTA (3) 3.6 0.0036 E14.5 retina TGAACTAGGC 3.6 0.0036 E14.5 retina TTTACCTGAC (3) 3.6 0.0036 E14.5 retina AATGTTTTTG (4) 1.8 0.0018 E14.5 retina AGCACAATCT (3) 1.8 0.0018 E14.5 retina GCTCTGAAGA (5) 1.8 0.0018 E14.5 retina GTTTTTTTTT (16) 1.8 0.0018 E16.5 retina AATGTTTCTG (4) 32.6 0.0326 E16.5 retina CTGTGCTTTA (3) 10.9 0.0109 E16.5 retina ACTGTTAAAC 1.8 0.0018 E16.5 retina AGCACAATCT (3) 1.8 0.0018 E16.5 retina TAGTTTAATC 1.8 0.0018 E16.5 retina TGAACTAGGC 1.8 0.0018 E18.5 retina AATGTTTCTG (4) 25.5 0.0255 E18.5 retina AGCACAATCT (3) 1.8 0.0018 E18.5 retina ATTTTGAAAT (2) 1.8 0.0018 E18.5 retina GTTTTTTTTT (16) 1.8 0.0018 P0.5 retina AATGTTTCTG (4) 23.6 0.0236 P0.5 retina CTGTGCTTTA (3) 9.8 0.0098 P0.5 retina TGAACTAGGC 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GTTTTTTTTT (16) 2 0.002 P2.5 retina AATGTTTCTG (4) 19.4 0.0194 P2.5 retina CTGTGCTTTA (3) 5.3 0.0053 P2.5 retina AATGTTTTTG (4) 1.8 0.0018 P2.5 retina AGACCAGCCT (3) 1.8 0.0018 P2.5 retina GCTCTGAAGA (5) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TGAACTAGGC 1.8 0.0018 P4.5 retina AATGTTTCTG (4) 9.9 0.0099 P4.5 retina TGAACTAGGC 7.9 0.0079 P4.5 retina ACTGTTAAAC 5.9 0.0059 P4.5 retina TTTACCTGAC (3) 4 0.004 P4.5 retina CTGTGCTTTA (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTTTTTTTTT (16) 2 0.002 P4.5 retina TTTCCCAGGT (2) 2 0.002 P6.5 retina CTGTGCTTTA (3) 10 0.01 P6.5 retina AATGTTTCTG (4) 6.7 0.0067 P6.5 retina TGAACTAGGC 6.7 0.0067 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GCTCTGAAGA (5) 1.7 0.0017 P10.5 crx- retina AATGTTTCTG (4) 16.7 0.0167 P10.5 crx- retina CTGTGCTTTA (3) 13 0.013 P10.5 crx- retina GTTTTTTTTT (16) 1.9 0.0019 P10.5 crx- retina TAGTTTAATC 1.9 0.0019 P10.5 crx- retina TGAACTAGGC 1.9 0.0019 P10.5 crx- retina TTTACCTGAC (3) 1.9 0.0019 P10.5 crx+ retina CTGTGCTTTA (3) 7.7 0.0077 P10.5 crx+ retina AATGTTTCTG (4) 5.8 0.0058 P10.5 crx+ retina GTTTTTTTTT (16) 1.9 0.0019 P10.5 crx+ retina TGAACTAGGC 1.9 0.0019 Adult retinal AATGTTTCTG (4) 3.7 0.0037 Adult retinal CTGTGCTTTA (3) 3.7 0.0037 Adult retinal TGAACTAGGC 3.7 0.0037 Adult retinal ATAAAAGTCT 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal GTGCAGGTGT (4) 1.9 0.0019 Adult retinal TTTCCCAGGT (2) 1.9 0.0019 ONL AATGTTTCTG (4) 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL ATAAAAGTCT 3.8 0.0038 ONL TGAACTAGGC 3.8 0.0038 ONL AGACCAGCCT (3) 1.9 0.0019 ONL CTGTGCTTTA (3) 1.9 0.0019