Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.180052	Ube2d2	ubiquitin-conjugating enzyme E2D 2	18		56550
Gene Ontology	ligase activity | protein binding | protein modification | ubiquitin conjugating enzyme activity | ubiquitin cycle | ubiquitin-dependent protein catabolism | ubiquitin-protein ligase activity
Human Homolog	UBE2D2[ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 115 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGTTTCTG AATGTTTTTG (3) AGACCAGCCT ATAAAAGTCT CTGTGCTTTA GTTTTTTTTT (2) TGAACTAGGC 37.4 0.0374 Cb medulloblastoma AATGTTTCTG AGCACAATCT ATTTTGAAAT CTGTGCTTTA GCTGTGCTTT (2) GTTTTTTTTT (2) TGAACTAGGC 25.3 0.0253 P8 GC+1d culture AATGTTTCTG AGCACAATCT CTGTGCTTTA GTTTTTTTTT (2) TGAACTAGGC TTTACCTGAC 13.5 0.0135 P8 GC+SHH+1d culture AATGTTTCTG ACTGTTAAAC CTGTGCTTTA GCTCTGAAGA (2) GCTGTGCTTT (2) GTTTTTTTTT (2) TAGTTTAATC TGAACTAGGC 38.8 0.0388 3T3 fibroblasts AATGTTTCTG CTGTGCTTTA GTCATAGCTG (2) 21 0.021 E15 cortex AATGTTTCTG GTCATAGCTG (2) 14.8 0.0148 P1 cortex AATGTTTCTG ACTGTTAAAC TTTCCCAGGT 13.5 0.0135 Hypothalamus AATGTTTCTG CTGTGCTTTA GTGCAGGTGT TGAACTAGGC TTTACCTGAC TTTCCCAGGT 18 0.018 E12.5 retina AATGTTTCTG ACTGTTAAAC CTGTGCTTTA GCTGTGCTTT (2) TGAACTAGGC 47 0.047 E14.5 retina AATGTTTCTG AATGTTTTTG (3) ACTGTTAAAC AGCACAATCT ATAAAAGTCT CTGTGCTTTA GCTCTGAAGA (2) GTTTTTTTTT (2) TGAACTAGGC TTTACCTGAC 56.2 0.0562 E16.5 retina AATGTTTCTG ACTGTTAAAC AGCACAATCT CTGTGCTTTA TAGTTTAATC TGAACTAGGC 50.7 0.0507 E18.5 retina AATGTTTCTG AGCACAATCT ATTTTGAAAT GTTTTTTTTT (2) 30.9 0.0309 P0.5 retina AATGTTTCTG CTGTGCTTTA GTCATAGCTG (2) GTTTTTTTTT (2) TGAACTAGGC 45.2 0.0452 P2.5 retina AATGTTTCTG AATGTTTTTG (3) AGACCAGCCT CTGTGCTTTA GCTCTGAAGA (2) GTCATAGCTG (2) TGAACTAGGC 33.7 0.0337 P4.5 retina AATGTTTCTG ACTGTTAAAC CTGTGCTTTA GTCATAGCTG (2) GTTTTTTTTT (2) TGAACTAGGC TTTACCTGAC TTTCCCAGGT 35.7 0.0357 P6.5 retina AATGTTTCTG CTGTGCTTTA GCTCTGAAGA (2) GTCATAGCTG (2) TGAACTAGGC 28.4 0.0284 P10.5 crx- retina AATGTTTCTG CTGTGCTTTA GTTTTTTTTT (2) TAGTTTAATC TGAACTAGGC TTTACCTGAC 37.3 0.0373 P10.5 crx+ retina AATGTTTCTG CTGTGCTTTA GTTTTTTTTT (2) TGAACTAGGC 17.3 0.0173 Adult retinal AATGTTTCTG ATAAAAGTCT CTGTGCTTTA GTCATAGCTG (2) GTGCAGGTGT TGAACTAGGC TTTCCCAGGT 18.7 0.0187 ONL AATGTTTCTG AGACCAGCCT ATAAAAGTCT CTGTGCTTTA GTCATAGCTG (2) TGAACTAGGC 24.8 0.0248