Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.180734	Rpa1	replication protein A1	11	11 44.0 cM	68275
Gene Ontology	chromatin binding | condensed chromosome | DNA replication | meiosis | nucleic acid binding | nucleus | nucleus
Human Homolog	RPA1[replication protein A1, 70kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 24 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTTCAGTTT (2) 3.3 0.0033 Cb medulloblastoma GCTTCAGTTT (2) 9.2 0.0092 P8 GC+1d culture GCTTCAGTTT (2) GGACAGCTCC (3) 5.7 0.0057 P8 GC+SHH+1d culture GCTTCAGTTT (2) GGACAGCTCC (3) 7.1 0.0071 3T3 fibroblasts GCTTCAGTTT (2) 14 0.014 E15 cortex GCTTCAGTTT (2) 9.9 0.0099 E12.5 retina GCTTCAGTTT (2) 9.4 0.0094 E14.5 retina GCGGCGGGAC GCTTCAGTTT (2) 5.4 0.0054 E16.5 retina GCTTCAGTTT (2) 3.6 0.0036 E18.5 retina GCTTCAGTTT (2) 7.3 0.0073 P0.5 retina GCTTCAGTTT (2) 13.7 0.0137 P2.5 retina GCTTCAGTTT (2) 5.3 0.0053 P4.5 retina GCTTCAGTTT (2) 4 0.004 P6.5 retina GCTTCAGTTT (2) 5 0.005 P10.5 crx- retina GCTTCAGTTT (2) GTTTCAGTTT 7.5 0.0075 P10.5 crx+ retina GCTTCAGTTT (2) 7.7 0.0077 Adult retinal GCTTCAGTTT (2) 9.3 0.0093 ONL GCGGCGGGAC GCTTCAGTTT (2) GTTTCAGTTT 13.4 0.0134