Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18472	Psmc6	proteasome (prosome, macropain) 26S subunit, ATPase, 6	14		67089
Gene Ontology	ATP binding | ATPase activity | cytoplasm | cytosol | hydrolase activity | nucleotide binding | nucleus | proteasome complex (sensu Eukarya) | protein catabolism
Human Homolog	PSMC6[proteasome (prosome, macropain) 26S subunit, ATPase, 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAGACATTG TATAAGCAAA TATAAGCAAC TGGCAATCAA TTTGGTGATG 24.5 0.0245 Cb medulloblastoma ACAGACATTG TATAAGCAAC TGGCAATCAA TTTGGTGATG 18.5 0.0185 P8 GC+1d culture TATAAGCAAC TCTCACAAGG TGGCAATCAA TTTGGTGATG 25.2 0.0252 P8 GC+SHH+1d culture ACAGACATTG GTCCAGCACA TAGCTCAATG TATAAGCAAA TATAAGCAAC TCTCACAAGG TGGCAATCAA TTTGGTGATG 18.8 0.0188 3T3 fibroblasts TGGCAATCAA 3.5 0.0035 E15 cortex ACAGACATTG TGGCAATCAA 14.8 0.0148 P1 cortex TGGCAATCAA 4.5 0.0045 Hypothalamus GCGGACCCTA (2) TATAAGCAAA TATAAGCAAC TGGCAATCAA 19.8 0.0198 E12.5 retina TATAAGCAAA TATAAGCAAC TGGCAATCAA TTTGGTGATG 16.9 0.0169 E14.5 retina ACAGACATTG TATAAGCAAA TATAAGCAAC TGGCAATCAA TTTGGTGATG 20 0.02 E16.5 retina ACAGACATTG TATAAGCAAA TATAAGCAAC TCTCACAAGG TGGCAATCAA TTTGGTGATG 21.6 0.0216 E18.5 retina TATAAGCAAA TATAAGCAAC TCTCACAAGG TGGCAATCAA TTTGGTGATG 38.2 0.0382 P0.5 retina TATAAGCAAA TCTCACAAGG TGGCAATCAA TTTGGTGATG 13.7 0.0137 P2.5 retina ACAGACATTG TATAAGCAAA TATAAGCAAC TGGCAATCAA TTTGGTGATG 22.8 0.0228 P4.5 retina TATAAGCAAA TATAAGCAAC TGGCAATCAA TTTGGTGATG 21.8 0.0218 P6.5 retina TATAAGCAAC TCTCACAAGG TGGCAATCAA TTTGGTGATG 19.9 0.0199 P10.5 crx- retina GCGGACCCTA (2) TATAAGCAAC TCTCACAAGG TTTGGTGATG 13 0.013 P10.5 crx+ retina TAGCTCAATG TATAAGCAAA TCTCACAAGG TGGCAATCAA TTTGGTGATG 21.1 0.0211 Adult retinal ACAGACATTG GTCCAGCACA TAGCTCAATG TATAAGCAAA TCTCACAAGG TGGCAATCAA TTTGGTGATG 18.8 0.0188 ONL TATAAGCAAC TCTCACAAGG TTTGGTGATG 9.5 0.0095