Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18539	Pink1	PTEN induced putative kinase 1	4		68943
Gene Ontology	ATP binding | kinase activity | magnesium ion binding | mitochondrion | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	PINK1[PTEN induced putative kinase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 121 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGCTCTGT CAAAAAAAAA (2) CCAAAAAAAA (3) CCAGAAAAAA (2) CCGAAAAAAA 78.2 0.0782 Cb medulloblastoma CAAAAAAAAA (2) CCAAAAAAAA (3) CCAGAAAAAA (2) 185 0.185 P8 GC+1d culture CAAAAAAAAA (2) CCAAAAAAAA (3) CCAGAAAAAA (2) CTGGTTGCTG (2) GTCATATCCA (2) 83.4 0.0834 P8 GC+SHH+1d culture CAAAAAAAAA (2) CCAAAAAAAA (3) CCAAAACAAA CCAGAAAAAA (2) CCGAAAAAAA CTGGTTGCTG (2) GCTGAGGCGC GTCATATCCA (2) TCAGGAGAAT 107.8 0.1078 3T3 fibroblasts CTGGTTGCTG (2) GCTGAGGCGC 7 0.007 E15 cortex CAAAAAAAAA (2) CCAAAAAAAA (3) CCAGAAAAAA (2) GTCATATCCA (2) 54.3 0.0543 P1 cortex CAAAAAAAAA (2) CCAAAAAAAA (3) CCAAAACAAA CCAGAAAAAA (2) GCTGAGGCGC GTCATATCCA (2) TCAGGAGAAT 86.1 0.0861 Hypothalamus ACAGTATACG ATGGCTCTGT CAAAAAAAAA (2) CCAAAAAAAA (3) CTGGTTGCTG (2) GCTGAGGCGC GTCATATCCA (2) TCAGGAGAAT 101.2 0.1012 E12.5 retina CAAAAAAAAA (2) CCAAAAAAAA (3) GCTGAGGCGC GTGGCTTTCA 48.8 0.0488 E14.5 retina CAAAAAAAAA (2) CCAAAAAAAA (3) CCAAAACAAA CCAGAAAAAA (2) CCGAATAAAA CTGGTTGCTG (2) GCTCATAGTC (3) GTCATATCCA (2) 39.9 0.0399 E16.5 retina ATGGCTCTGT CAAAAAAAAA (2) CCAAAAAAAA (3) CTGGTTGCTG (2) GTCATATCCA (2) TCAGGAGAAT 32.6 0.0326 E18.5 retina CAAAAAAAAA (2) CCAAAAAAAA (3) CCAGAAAAAA (2) CCGAAAAAAA CCGAATAAAA GTCATATCCA (2) 89 0.089 P0.5 retina CAAAAAAAAA (2) CCAAAAAAAA (3) CCAAAACAAA CCGAAAAAAA CTGGTTGCTG (2) GCTGAGGCGC GTGGCTTTCA 178.7 0.1787 P2.5 retina ATGGCTCTGT CAAAAAAAAA (2) CCAAAAAAAA (3) CCAAAACAAA CCAGAAAAAA (2) CCGAAAAAAA TCAGGAGAAT 107.5 0.1075 P4.5 retina ATGGCTCTGT CAAAAAAAAA (2) CCAAAAAAAA (3) CCGAATAAAA 85.2 0.0852 P6.5 retina ATGGCTCTGT CAAAAAAAAA (2) CCAAAAAAAA (3) CCAGAAAAAA (2) CCGAAAAAAA CCGAATAAAA GCTGAGGCGC GTCATATCCA (2) TCAGGAGAAT 86.7 0.0867 P10.5 crx- retina ATGGCTCTGT CAAAAAAAAA (2) CCAAAAAAAA (3) CCAGAAAAAA (2) CTGGTTGCTG (2) GCTCATAGTC (3) GTCATATCCA (2) TCAGGAGAAT 44.8 0.0448 P10.5 crx+ retina ATGGCTCTGT CAAAAAAAAA (2) CCAAAAAAAA (3) CCAAAACAAA CCAGAAAAAA (2) CTGGTTGCTG (2) GTCATATCCA (2) TCAGGAGAAT 90.2 0.0902 Adult retinal CAAAAAAAAA (2) CCAAAAAAAA (3) CCAGAAAAAA (2) CCGAAAAAAA GCTCATAGTC (3) GTCATATCCA (2) TCAGGAGAAT 65.1 0.0651 ONL CAAAAAAAAA (2) CCAAAAAAAA (3) GTCATATCCA (2) GTGGCTTTCA 28.7 0.0287