Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18579	Polr2e	polymerase (RNA) II (DNA directed) polypeptide E	10		66420
Gene Ontology	DNA binding | DNA-directed RNA polymerase activity | DNA-directed RNA polymerase II, core complex | nucleus | protein binding | transcription | transcription from Pol II promoter | transferase activity
Human Homolog	POLR2E[polymerase (RNA) II (DNA directed) polypeptide E, 25kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTGTCAGC (3) 9.8 0.0098 P8 Cb GC ACAAAGGAGG (2) 4.9 0.0049 P8 Cb GC CAGGGAAACC (2) 1.6 0.0016 Cb medulloblastoma TGCTGTCAGC (3) 9.2 0.0092 Cb medulloblastoma GGGTGCATCT (6) 4.6 0.0046 P8 GC+1d culture TGCTGTCAGC (3) 12.6 0.0126 P8 GC+1d culture CAGGGAAACC (2) 11.4 0.0114 P8 GC+1d culture ACAAAGGAGG (2) 1.1 0.0011 P8 GC+1d culture ACCGTGGCTT (3) 1.1 0.0011 P8 GC+SHH+1d culture CAGGGAAACC (2) 11.7 0.0117 P8 GC+SHH+1d culture TGCTGTCAGC (3) 9.4 0.0094 P8 GC+SHH+1d culture ACAAAGGAGG (2) 3.5 0.0035 P8 GC+SHH+1d culture CGGTGCAGCT 1.2 0.0012 P8 GC+SHH+1d culture GGGTGCATCT (6) 1.2 0.0012 3T3 fibroblasts ACAAAGGAGG (2) 10.5 0.0105 3T3 fibroblasts TGCTGTCAGC (3) 10.5 0.0105 3T3 fibroblasts CAGGGAAACC (2) 7 0.007 E15 cortex CAGGCAAACC (7) 4.9 0.0049 E15 cortex CAGGGAAACC (2) 4.9 0.0049 E15 cortex TGCTGTCAGC (3) 4.9 0.0049 P1 cortex CAGGGAAACC (2) 9.1 0.0091 P1 cortex ACCGTGGCTT (3) 4.5 0.0045 P1 cortex TGCTGTCAGC (3) 4.5 0.0045 Hypothalamus TGCTGTCAGC (3) 5.4 0.0054 Hypothalamus CAGGGAAACC (2) 3.6 0.0036 Hypothalamus GGGTGCAGCT 3.6 0.0036 Hypothalamus ACAAAGGAGG (2) 1.8 0.0018 Hypothalamus ACCGTGGCTT (3) 1.8 0.0018 Hypothalamus CAGGCAAACC (7) 1.8 0.0018 E12.5 retina CAGGGAAACC (2) 13.1 0.0131 E12.5 retina TGCTGTCAGC (3) 9.4 0.0094 E12.5 retina ACAAAGGAGG (2) 1.9 0.0019 E12.5 retina ACCGTGGCTT (3) 1.9 0.0019 E14.5 retina TGCTGTCAGC (3) 7.3 0.0073 E14.5 retina CAGGGAAACC (2) 5.5 0.0055 E14.5 retina ACAAAGGAGG (2) 1.8 0.0018 E14.5 retina CAGGGAAAAC (2) 1.8 0.0018 E14.5 retina CGGTGCAGCT 1.8 0.0018 E14.5 retina TTTGTGTTCT (5) 1.8 0.0018 E16.5 retina CAGGGAAACC (2) 18.1 0.0181 E16.5 retina TGCTGTCAGC (3) 7.2 0.0072 E16.5 retina CGGTGCAGCT 3.6 0.0036 E16.5 retina ACAAAGGAGG (2) 1.8 0.0018 E18.5 retina CAGGGAAACC (2) 5.5 0.0055 E18.5 retina CGGTGCAGCT 1.8 0.0018 P0.5 retina TGCTGTCAGC (3) 15.7 0.0157 P0.5 retina CAGGGAAACC (2) 9.8 0.0098 P0.5 retina ACAAAGGAGG (2) 3.9 0.0039 P0.5 retina TTTGTGTTCT (5) 2 0.002 P2.5 retina CAGGGAAACC (2) 5.3 0.0053 P2.5 retina TGCTGTCAGC (3) 3.5 0.0035 P2.5 retina ACCGTGGCTT (3) 1.8 0.0018 P4.5 retina TGCTGTCAGC (3) 9.9 0.0099 P4.5 retina CAGGGAAACC (2) 5.9 0.0059 P4.5 retina ACAAAGGAGG (2) 2 0.002 P4.5 retina ACCGTGGCTT (3) 2 0.002 P4.5 retina GGGTGCAGCT 2 0.002 P6.5 retina TGCTGTCAGC (3) 10 0.01 P6.5 retina CAGGGAAACC (2) 8.3 0.0083 P6.5 retina CAGGGAAAAC (2) 1.7 0.0017 P6.5 retina GGGTGCAGCT 1.7 0.0017 P10.5 crx- retina TGCTGTCAGC (3) 16.7 0.0167 P10.5 crx- retina CAGGGAAACC (2) 9.3 0.0093 P10.5 crx- retina ACAAAGGAGG (2) 5.6 0.0056 P10.5 crx- retina ACCGTGGCTT (3) 3.7 0.0037 P10.5 crx- retina CAGGGAAAAC (2) 1.9 0.0019 P10.5 crx+ retina TGCTGTCAGC (3) 15.4 0.0154 P10.5 crx+ retina CAGGGAAACC (2) 7.7 0.0077 P10.5 crx+ retina ACCGTGGCTT (3) 1.9 0.0019 Adult retinal CAGGGAAACC (2) 18.5 0.0185 Adult retinal TGCTGTCAGC (3) 7.4 0.0074 Adult retinal ACAAAGGAGG (2) 5.6 0.0056 Adult retinal CAGGCAAACC (7) 3.7 0.0037 Adult retinal ACCGTGGCTT (3) 1.9 0.0019 ONL CAGGGAAACC (2) 9.6 0.0096 ONL TGCTGTCAGC (3) 7.7 0.0077 ONL TTTGTGTTCT (5) 3.8 0.0038 ONL ACAAAGGAGG (2) 1.9 0.0019 ONL CAGGCAAACC (7) 1.9 0.0019