Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18579	Polr2e	polymerase (RNA) II (DNA directed) polypeptide E	10		66420
Gene Ontology	DNA binding | DNA-directed RNA polymerase activity | DNA-directed RNA polymerase II, core complex | nucleus | protein binding | transcription | transcription from Pol II promoter | transferase activity
Human Homolog	POLR2E[polymerase (RNA) II (DNA directed) polypeptide E, 25kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAAAGGAGG (2) CAGGGAAACC TGCTGTCAGC 16.3 0.0163 Cb medulloblastoma GGGTGCATCT (3) TGCTGTCAGC 13.8 0.0138 P8 GC+1d culture ACAAAGGAGG (2) ACCGTGGCTT (2) CAGGGAAACC TGCTGTCAGC 26.2 0.0262 P8 GC+SHH+1d culture ACAAAGGAGG (2) CAGGGAAACC CGGTGCAGCT GGGTGCATCT (3) TGCTGTCAGC 27 0.027 3T3 fibroblasts ACAAAGGAGG (2) CAGGGAAACC TGCTGTCAGC 28 0.028 E15 cortex CAGGCAAACC (2) CAGGGAAACC TGCTGTCAGC 14.7 0.0147 P1 cortex ACCGTGGCTT (2) CAGGGAAACC TGCTGTCAGC 18.1 0.0181 Hypothalamus ACAAAGGAGG (2) ACCGTGGCTT (2) CAGGCAAACC (2) CAGGGAAACC GGGTGCAGCT TGCTGTCAGC 18 0.018 E12.5 retina ACAAAGGAGG (2) ACCGTGGCTT (2) CAGGGAAACC TGCTGTCAGC 26.3 0.0263 E14.5 retina ACAAAGGAGG (2) CAGGGAAAAC (2) CAGGGAAACC CGGTGCAGCT TGCTGTCAGC TTTGTGTTCT (3) 20 0.02 E16.5 retina ACAAAGGAGG (2) CAGGGAAACC CGGTGCAGCT TGCTGTCAGC 30.7 0.0307 E18.5 retina CAGGGAAACC CGGTGCAGCT 7.3 0.0073 P0.5 retina ACAAAGGAGG (2) CAGGGAAACC TGCTGTCAGC TTTGTGTTCT (3) 31.4 0.0314 P2.5 retina ACCGTGGCTT (2) CAGGGAAACC TGCTGTCAGC 10.6 0.0106 P4.5 retina ACAAAGGAGG (2) ACCGTGGCTT (2) CAGGGAAACC GGGTGCAGCT TGCTGTCAGC 21.8 0.0218 P6.5 retina CAGGGAAAAC (2) CAGGGAAACC GGGTGCAGCT TGCTGTCAGC 21.7 0.0217 P10.5 crx- retina ACAAAGGAGG (2) ACCGTGGCTT (2) CAGGGAAAAC (2) CAGGGAAACC TGCTGTCAGC 37.2 0.0372 P10.5 crx+ retina ACCGTGGCTT (2) CAGGGAAACC TGCTGTCAGC 25 0.025 Adult retinal ACAAAGGAGG (2) ACCGTGGCTT (2) CAGGCAAACC (2) CAGGGAAACC TGCTGTCAGC 37.1 0.0371 ONL ACAAAGGAGG (2) CAGGCAAACC (2) CAGGGAAACC TGCTGTCAGC TTTGTGTTCT (3) 24.9 0.0249