Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.186185	9430088D19Rik	RIKEN cDNA 9430088D19 gene	1		320807
Mm.186185	Prdx6	peroxiredoxin 6	1	1 83.6 cM	11758
Gene Ontology	antioxidant activity | catalytic activity | cytosol | hydrolase activity | lipid catabolism | lysosome | oxidoreductase activity | peroxidase activity | peroxidase activity | response to reactive oxygen species
Human Homolog	PRDX6[peroxiredoxin 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTTCCCCT (7) 1.6 0.0016 P8 Cb GC TACCTCCTAG (2) 1.6 0.0016 Cb medulloblastoma TACCTCCTAG (2) 11.6 0.0116 Cb medulloblastoma ATCACAGCCG (3) 6.9 0.0069 Cb medulloblastoma GGAAAGGAGG (7) 2.3 0.0023 P8 GC+1d culture TACCTCCTAG (2) 6.8 0.0068 P8 GC+1d culture ATCACAGCCG (3) 5.7 0.0057 P8 GC+1d culture GGAAAGGAGG (7) 1.1 0.0011 P8 GC+SHH+1d culture TACCTCCTAG (2) 8.2 0.0082 P8 GC+SHH+1d culture ATCACAGCCG (3) 7 0.007 P8 GC+SHH+1d culture GGAAAGGAGG (7) 2.3 0.0023 3T3 fibroblasts ATCACAGCCG (3) 14 0.014 3T3 fibroblasts TACCTCCTAG (2) 10.5 0.0105 3T3 fibroblasts GGAAAGGAGG (7) 3.5 0.0035 E15 cortex TACCTCCTAG (2) 4.9 0.0049 P1 cortex TACCTCCTAG (2) 4.5 0.0045 P1 cortex TTTTCCTAAA (3) 4.5 0.0045 Hypothalamus TACCTCCTAG (2) 12.7 0.0127 Hypothalamus TTTTCCTAAA (3) 1.8 0.0018 E12.5 retina TACCTCCTAG (2) 11.3 0.0113 E12.5 retina ATCACAGCCG (3) 1.9 0.0019 E14.5 retina ATCACAGCCG (3) 9.1 0.0091 E14.5 retina TACCTCCTAG (2) 7.3 0.0073 E14.5 retina GGACAGAGAC (3) 5.5 0.0055 E16.5 retina TACCTCCTAG (2) 10.9 0.0109 E16.5 retina ATCACAGCCG (3) 7.2 0.0072 E16.5 retina GGAAAGGAGG (7) 3.6 0.0036 E16.5 retina GGACAGAGAC (3) 1.8 0.0018 E18.5 retina TACCTCCTAG (2) 3.6 0.0036 E18.5 retina ATCACAGCCG (3) 1.8 0.0018 P0.5 retina TACCTCCTAG (2) 17.7 0.0177 P0.5 retina ATCACAGCCG (3) 2 0.002 P0.5 retina GGAAAGGAGG (7) 2 0.002 P2.5 retina TACCTCCTAG (2) 12.3 0.0123 P4.5 retina TACCTCCTAG (2) 11.9 0.0119 P4.5 retina ATCACAGCCG (3) 7.9 0.0079 P4.5 retina GGAAAGGAGG (7) 2 0.002 P6.5 retina TACCTCCTAG (2) 10 0.01 P6.5 retina GGTTTCCCCT (7) 8.3 0.0083 P6.5 retina ATCACAGCCG (3) 3.3 0.0033 P6.5 retina GGAAAGGAGG (7) 1.7 0.0017 P10.5 crx- retina ATCACAGCCG (3) 7.4 0.0074 P10.5 crx- retina GGTTTCCCCT (7) 7.4 0.0074 P10.5 crx- retina TACCTCCTAG (2) 5.6 0.0056 P10.5 crx+ retina GGTTTCCCCT (7) 17.3 0.0173 P10.5 crx+ retina ATCACAGCCG (3) 7.7 0.0077 P10.5 crx+ retina TACCTCCTAG (2) 5.8 0.0058 P10.5 crx+ retina TTTTCCTAAA (3) 1.9 0.0019 Adult retinal GGTTTCCCCT (7) 53.7 0.0537 Adult retinal ATCACAGCCG (3) 5.6 0.0056 Adult retinal TACCTCCTAG (2) 3.7 0.0037 Adult retinal GGACAGAGAC (3) 1.9 0.0019 ONL GGTTTCCCCT (7) 28.7 0.0287