Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.186185	9430088D19Rik	RIKEN cDNA 9430088D19 gene	1		320807
Mm.186185	Prdx6	peroxiredoxin 6	1	1 83.6 cM	11758
Gene Ontology	antioxidant activity | catalytic activity | cytosol | hydrolase activity | lipid catabolism | lysosome | oxidoreductase activity | peroxidase activity | peroxidase activity | response to reactive oxygen species
Human Homolog	PRDX6[peroxiredoxin 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTTCCCCT TACCTCCTAG (2) 3.2 0.0032 Cb medulloblastoma ATCACAGCCG (3) GGAAAGGAGG TACCTCCTAG (2) 20.8 0.0208 P8 GC+1d culture ATCACAGCCG (3) GGAAAGGAGG TACCTCCTAG (2) 13.6 0.0136 P8 GC+SHH+1d culture ATCACAGCCG (3) GGAAAGGAGG TACCTCCTAG (2) 17.5 0.0175 3T3 fibroblasts ATCACAGCCG (3) GGAAAGGAGG TACCTCCTAG (2) 28 0.028 E15 cortex TACCTCCTAG (2) 4.9 0.0049 P1 cortex TACCTCCTAG (2) TTTTCCTAAA 9 0.009 Hypothalamus TACCTCCTAG (2) TTTTCCTAAA 14.5 0.0145 E12.5 retina ATCACAGCCG (3) TACCTCCTAG (2) 13.2 0.0132 E14.5 retina ATCACAGCCG (3) GGACAGAGAC (2) TACCTCCTAG (2) 21.9 0.0219 E16.5 retina ATCACAGCCG (3) GGAAAGGAGG GGACAGAGAC (2) TACCTCCTAG (2) 23.5 0.0235 E18.5 retina ATCACAGCCG (3) TACCTCCTAG (2) 5.4 0.0054 P0.5 retina ATCACAGCCG (3) GGAAAGGAGG TACCTCCTAG (2) 21.7 0.0217 P2.5 retina TACCTCCTAG (2) 12.3 0.0123 P4.5 retina ATCACAGCCG (3) GGAAAGGAGG TACCTCCTAG (2) 21.8 0.0218 P6.5 retina ATCACAGCCG (3) GGAAAGGAGG GGTTTCCCCT TACCTCCTAG (2) 23.3 0.0233 P10.5 crx- retina ATCACAGCCG (3) GGTTTCCCCT TACCTCCTAG (2) 20.4 0.0204 P10.5 crx+ retina ATCACAGCCG (3) GGTTTCCCCT TACCTCCTAG (2) TTTTCCTAAA 32.7 0.0327 Adult retinal ATCACAGCCG (3) GGACAGAGAC (2) GGTTTCCCCT TACCTCCTAG (2) 64.9 0.0649 ONL GGTTTCCCCT 28.7 0.0287