Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.186361	Ptpro	protein tyrosine phosphatase, receptor type, O	6		19277
Gene Ontology	hydrolase activity | integral to membrane | phosphoprotein phosphatase activity | plasma membrane | protein amino acid dephosphorylation | protein-tyrosine-phosphatase activity | receptor activity | transmembrane receptor protein tyrosine phosphatase signaling pathway
Human Homolog	PTPRO[protein tyrosine phosphatase, receptor type, O]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC AAAAAAAAAC (24) 4.9 0.0049 P8 Cb GC GGAAGGAGGG (7) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GGAAGGAGGG (7) 13.9 0.0139 Cb medulloblastoma AAAAAAAAAC (24) 4.6 0.0046 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture GGAAGGAGGG (7) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAC (24) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture AAAAAAAAAC (24) 3.5 0.0035 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GCTACACAGG (3) 3.5 0.0035 3T3 fibroblasts GGAAGGAGGG (7) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GGAAGGAGGG (7) 9.9 0.0099 E15 cortex AAAAAAAAAC (24) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex AAAAAAAAAC (24) 9.1 0.0091 P1 cortex GGAAGGAGGG (7) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus GGAAGGAGGG (7) 5.4 0.0054 Hypothalamus AAAAAAAAAC (24) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GGAAGGAGGG (7) 5.6 0.0056 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina GGAAGGAGGG (7) 3.6 0.0036 E14.5 retina AAAAAAAAAC (24) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina GGAAGGAGGG (7) 3.6 0.0036 E16.5 retina AAAAAAAAAC (24) 1.8 0.0018 E16.5 retina ATTGTGTGTT (4) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GGAAGGAGGG (7) 9.1 0.0091 E18.5 retina AAAAAAAAAC (24) 3.6 0.0036 E18.5 retina GCTACACAGG (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GGAAGGAGGG (7) 5.9 0.0059 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GGAAGGAGGG (7) 12.3 0.0123 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina AAAAAAAAAC (24) 5.3 0.0053 P2.5 retina ATTGTGTGTT (4) 1.8 0.0018 P2.5 retina CTGAGTTTGT 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GGAAGGAGGG (7) 27.7 0.0277 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina ATTGTGTGTT (4) 4 0.004 P4.5 retina AAAAAAAAAC (24) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GGAAGGAGGG (7) 15 0.015 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina AAAAAAAAAC (24) 5 0.005 P6.5 retina ATTGTGTGTT (4) 3.3 0.0033 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GGAAGGAGGG (7) 5.6 0.0056 P10.5 crx- retina GCTACACAGG (3) 3.7 0.0037 P10.5 crx- retina AAAAAAAAAC (24) 1.9 0.0019 P10.5 crx- retina CTGAGTTTGT 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GGAAGGAGGG (7) 19.2 0.0192 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina ATTGTGTGTT (4) 1.9 0.0019 P10.5 crx+ retina CTGAGTTTGT 1.9 0.0019 P10.5 crx+ retina GCTACACAGG (3) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GGAAGGAGGG (7) 7.4 0.0074 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal ATTGTGTGTT (4) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GGAAGGAGGG (7) 7.7 0.0077 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL ATTGTGTGTT (4) 1.9 0.0019 ONL GCTACACAGG (3) 1.9 0.0019