Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18714	Pxn	paxillin	5	5 60.0 cM	19303
Gene Ontology	activation of MAPK | branching morphogenesis | cell motility | cell-matrix adhesion | cytoskeleton | cytoskeleton organization and biogenesis | focal adhesion | focal adhesion | focal adhesion formation | integrin-mediated signaling pathway | integrin-mediated signaling pathway | lamellipodium | lamellipodium biogenesis | protein binding | protein binding | receptor signaling complex scaffold activity
Human Homolog	PXN[paxillin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma ATTTTCACCC (2) 6.9 0.0069 Cb medulloblastoma ATTTTCAAAA (5) 4.6 0.0046 Cb medulloblastoma GAAAACTTTA 4.6 0.0046 Cb medulloblastoma GCAAACTTTA (6) 2.3 0.0023 P8 GC+1d culture ATTTTCACCC (2) 2.3 0.0023 P8 GC+1d culture ATTTCAAAAA (10) 1.1 0.0011 P8 GC+1d culture ATTTTCAAAA (5) 1.1 0.0011 P8 GC+SHH+1d culture ATTTTCAAAA (5) 8.2 0.0082 P8 GC+SHH+1d culture ATTTTCACCC (2) 3.5 0.0035 P8 GC+SHH+1d culture ATTTCAAAAA (10) 1.2 0.0012 3T3 fibroblasts GCAAACCTTA (2) 3.5 0.0035 E15 cortex CTTTCTCCCC (2) 9.9 0.0099 E15 cortex ATTTTCACCC (2) 4.9 0.0049 P1 cortex CTTTCTCCCC (2) 4.5 0.0045 Hypothalamus ATTTTCAAAA (5) 1.8 0.0018 Hypothalamus GAAAACTTTA 1.8 0.0018 E12.5 retina GCAAACCTTA (2) 1.9 0.0019 E14.5 retina ATTTTCAAAA (5) 1.8 0.0018 E14.5 retina ATTTTCACCC (2) 1.8 0.0018 E14.5 retina GCAAACTTTA (6) 1.8 0.0018 E16.5 retina ATTTTCAAAA (5) 3.6 0.0036 E16.5 retina ATTTTCACCC (2) 1.8 0.0018 E16.5 retina GCAAACTTTA (6) 1.8 0.0018 E18.5 retina ATTTTCACCC (2) 3.6 0.0036 P0.5 retina ATTTTCAAAA (5) 2 0.002 P0.5 retina CTTTCTCCCC (2) 2 0.002 P0.5 retina GAAAACTTTA 2 0.002 P2.5 retina ATTTTCAAAA (5) 5.3 0.0053 P2.5 retina ATTTTCACCC (2) 3.5 0.0035 P2.5 retina ATTTCAAAAA (10) 1.8 0.0018 P4.5 retina ATTTTCAAAA (5) 5.9 0.0059 P4.5 retina ATTTTCACCC (2) 5.9 0.0059 P4.5 retina CTTTCTCCCC (2) 2 0.002 P6.5 retina ATTTTCAAAA (5) 1.7 0.0017 P6.5 retina ATTTTCACCC (2) 1.7 0.0017 P10.5 crx- retina ATTTCAAAAA (10) 1.9 0.0019 P10.5 crx- retina GCAAACCTTA (2) 1.9 0.0019 P10.5 crx+ retina ATTTTCACCC (2) 3.8 0.0038 P10.5 crx+ retina CTTTCTCCCC (2) 3.8 0.0038 P10.5 crx+ retina ATTTCAAAAA (10) 1.9 0.0019 Adult retinal ATTTTCACCC (2) 1.9 0.0019 ONL ATTTTCAAAA (5) 3.8 0.0038 ONL CTTTCTCCCC (2) 1.9 0.0019