Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19133	Aplp2	amyloid beta (A4) precursor-like protein 2	9	9 13.0 cM	11804
Gene Ontology	binding | DNA binding | extracellular space | integral to membrane | nucleus | protein binding
Human Homolog	APLP2[amyloid beta (A4) precursor-like protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATTGGATC CAGGAGAGAT (2) GCACCGAGTA GGACTTTATT 8.1 0.0081 Cb medulloblastoma AAATTGGATC TCTGACTGAG 9.2 0.0092 P8 GC+1d culture AAATTGGATC CACAACCCAG CACTGACCCT GAGGGAGCCA (3) TGTGAGACAA 16 0.016 P8 GC+SHH+1d culture AAATTGGATC TGTGAGACAA 7.1 0.0071 3T3 fibroblasts AAATTGGATC 3.5 0.0035 E15 cortex AAATTGGATC 4.9 0.0049 P1 cortex AAATTGGATC 4.5 0.0045 Hypothalamus AAATTGGATC CAGGAGAGAT (2) GAGGGAGCCA (3) GCTGAGGACC 12.6 0.0126 E12.5 retina AAATTGGATC CAGGAGAGAT (2) GTTCTGCATC TCTGACTGAG TGAAAATTCA 13.2 0.0132 E14.5 retina GAGGGAGCCA (3) 1.8 0.0018 E16.5 retina AAATTGGATC GAGGGAGCCA (3) GTTCTGCATC TCTGACTGAG 10.8 0.0108 E18.5 retina AAATTGGATC GGACTTTATT 3.6 0.0036 P0.5 retina AAATTGGATC CTCTATATAA GAGGGAGCCA (3) GGACTTTATT TCTGACTGAG 13.8 0.0138 P2.5 retina AAATTGGATC TCTGACTGAG TGTGAGACAA 5.4 0.0054 P4.5 retina AAATTGGATC CAGGAGAGAT (2) GAGGGAGCCA (3) TGAAAATTCA 10 0.01 P6.5 retina AAATTGGATC CAGGAGAGAT (2) CTCTATATAA GAGGGAGCCA (3) TGTGAGACAA 18.4 0.0184 P10.5 crx- retina AAATTGGATC CACAACCCAG 18.6 0.0186 P10.5 crx+ retina AAATTGGATC CACAACCCAG CACTGACCCT GAGGGAGCCA (3) GCTGAGGACC TGAAAATTCA 23 0.023 Adult retinal AAATTGGATC GAGGGAGCCA (3) GCTGAGGACC TGTGAGACAA 16.7 0.0167 ONL AAATTGGATC CACAACCCAG GAGGGAGCCA (3) GCTGAGGACC GTTCTGCATC TGAAAATTCA 21 0.021