Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19187	Ptma	prothymosin alpha	1		19231
Gene Ontology	nucleus
Human Homolog	PTMA[prothymosin, alpha (gene sequence 28)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 120 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAAGGAAAA GGAGGAAAAA GGGAGGGAAA GTCACACCAC TCAGACGCGG TCATATCTGT (3) TTCATTATAA TTCCTTATAA 212 0.212 Cb medulloblastoma GGAGGAAAAA GTCACACCAC TTCATAATAA TTCATTATAA 16.1 0.0161 P8 GC+1d culture GGAAGGAAAA GGAGGAAAAA GGAGGACACA (2) GTCACACCAC TCATATCTGT (3) TTCATAATAA TTCATTATAA 119.8 0.1198 P8 GC+SHH+1d culture GGAGGAAAAA GGAGGACACA (2) GGGGAGGGAA (2) GTCACACCAC TCAGACGCGG TCATATCTGT (3) TTCATAATAA TTCATTATAA TTCCTTATAA 187.3 0.1873 3T3 fibroblasts GGAGGAAAAA GTCACACCAC TCAGACGCGG TCATATCTGT (3) TTCATTATAA 49 0.049 E15 cortex GGAGGAAAAA GGGGAGGGAA (2) GTCACACCAC TCAGACGCGG TCATATCTGT (3) 108.7 0.1087 P1 cortex GGAGGAAAAA GTCACACCAC TCATATCTGT (3) TTCATAATAA TTCATTATAA 109 0.109 Hypothalamus GGAGGAAAAA TTCATTATAA 18.1 0.0181 E12.5 retina GCTCACACCA (2) GGAGGAAAAA GTCACACCAC TCAGACGCGG TCATATCTGT (3) TTCATTATAA TTCCTTATAA 167.2 0.1672 E14.5 retina CGCTCTCCAC GCTCACACCA (2) GGAGGAAAAA GGAGGACACA (2) GTCACACCAC TCAGACGCGG TCATATCTGT (3) TTCATTATAA 74.6 0.0746 E16.5 retina CGCTCTCCAC GCTCACACCA (2) GGAGGAAAAA GTCACACCAC TCAGACGCGG TCATATCTGT (3) TTCATTATAA TTCCTTATAA 72.3 0.0723 E18.5 retina CGCTCTCCAC GCTCACACCA (2) GGAAGGAAAA GGAGGAAAAA GTCACACCAC TCAGACGCGG TTCATTATAA 114.5 0.1145 P0.5 retina CGCTCTCCAC GGAGGAAAAA GTCACACCAC TCAGACGCGG TCATATCTGT (3) TTCATTATAA TTCCTTATAA 102.2 0.1022 P2.5 retina CGCTCTCCAC GGAAGGAAAA GGAGGAAAAA GGGAGGGAAA GTCACACCAC TCATATCTGT (3) TTCATTATAA TTCCTTATAA 111 0.111 P4.5 retina GCTCACACCA (2) GGAAGGAAAA GGAGGAAAAA GTCACACCAC TCAGACGCGG TCATATCTGT (3) TTCATTATAA 101.1 0.1011 P6.5 retina GGAGGAAAAA GGAGGACACA (2) GGGGAGGGAA (2) GTCACACCAC TCATATCTGT (3) TTCATTATAA 46.8 0.0468 P10.5 crx- retina GCTCACACCA (2) GGAGGAAAAA GTCACACCAC TCATATCTGT (3) TTCATTATAA 48.4 0.0484 P10.5 crx+ retina GGAAGGAAAA GGAGGAAAAA GGGAGGGAAA GTCACACCAC TTCATTATAA TTCCTTATAA 51.8 0.0518 Adult retinal CGCTCTCCAC GGAGGACACA (2) TTCATTATAA 11.2 0.0112 ONL GGAGGAAAAA GTCACACCAC TTCATTATAA 26.8 0.0268