Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.192162
D9Ertd356e
DNA segment, Chr 9, ERATO Doi 356, expressed
9
9 52.0 cM
52282
Mm.192162
Clstn2
calsyntenin 2
9
64085
Mm.192162
9430018C23Rik
RIKEN cDNA 9430018C23 gene
9
77267
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAAAGGGCT (
3
)
TAGCGCGCCC (
3
)
3.2
0.0032
Cb medulloblastoma
TTGGTGGTCA
(
3
)
4.6
0.0046
P8 GC+1d culture
GCCCCAGCCC
GGAAAGGGCT (
3
)
TAGCGCGCCC (
3
)
3.3
0.0033
P8 GC+SHH+1d culture
TTGGTGGTCA
(
3
)
1.2
0.0012
3T3 fibroblasts
TAGCGCGCCC (
3
)
3.5
0.0035
E15 cortex
CATCTTTGGA
(
3
)
4.9
0.0049
P1 cortex
CATCTTTGGA
(
3
)
TTGGTGGTCA
(
3
)
9
0.009
Hypothalamus
TTGGTGGTCA
(
3
)
7.2
0.0072
E12.5 retina
GCCCCAGCCC
GGAAAGGGCT (
3
)
13.2
0.0132
E14.5 retina
GCCCCAGCCC
GGAAAGGGCT (
3
)
5.4
0.0054
E16.5 retina
GCCCCAGCCC
TTGGTGGTCA
(
3
)
9
0.009
E18.5 retina
CATCTTTGGA
(
3
)
GCCCCAGCCC
TTGGTGGTCA
(
3
)
9
0.009
P0.5 retina
GCCCCAGCCC
2
0.002
P2.5 retina
GCCCCAGCCC
GGAAAGGGCT (
3
)
7.1
0.0071
P4.5 retina
GCCCCAGCCC
5.9
0.0059
P6.5 retina
GCCCCAGCCC
1.7
0.0017
P10.5 crx- retina
GCCCCAGCCC
GGAAAGGGCT (
3
)
TTGGTGGTCA
(
3
)
11.2
0.0112
P10.5 crx+ retina
GCCCCAGCCC
TTGGTGGTCA
(
3
)
11.5
0.0115
Adult retinal
GCCCCAGCCC
TTGGTGGTCA
(
3
)
5.6
0.0056
ONL
GCCCCAGCCC
1.9
0.0019
