Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.192162
D9Ertd356e
DNA segment, Chr 9, ERATO Doi 356, expressed
9
9 52.0 cM
52282
Mm.192162
Clstn2
calsyntenin 2
9
64085
Mm.192162
9430018C23Rik
RIKEN cDNA 9430018C23 gene
9
77267
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGAAAGGGCT (
7
)
1.6
0.0016
P8 Cb GC
TAGCGCGCCC (
35
)
1.6
0.0016
Cb medulloblastoma
TTGGTGGTCA
(
3
)
4.6
0.0046
P8 GC+1d culture
GCCCCAGCCC (
13
)
1.1
0.0011
P8 GC+1d culture
GGAAAGGGCT (
7
)
1.1
0.0011
P8 GC+1d culture
TAGCGCGCCC (
35
)
1.1
0.0011
P8 GC+SHH+1d culture
TTGGTGGTCA
(
3
)
1.2
0.0012
3T3 fibroblasts
TAGCGCGCCC (
35
)
3.5
0.0035
E15 cortex
CATCTTTGGA
(
5
)
4.9
0.0049
P1 cortex
CATCTTTGGA
(
5
)
4.5
0.0045
P1 cortex
TTGGTGGTCA
(
3
)
4.5
0.0045
Hypothalamus
TTGGTGGTCA
(
3
)
7.2
0.0072
E12.5 retina
GCCCCAGCCC (
13
)
11.3
0.0113
E12.5 retina
GGAAAGGGCT (
7
)
1.9
0.0019
E14.5 retina
GCCCCAGCCC (
13
)
3.6
0.0036
E14.5 retina
GGAAAGGGCT (
7
)
1.8
0.0018
E16.5 retina
GCCCCAGCCC (
13
)
7.2
0.0072
E16.5 retina
TTGGTGGTCA
(
3
)
1.8
0.0018
E18.5 retina
GCCCCAGCCC (
13
)
3.6
0.0036
E18.5 retina
TTGGTGGTCA
(
3
)
3.6
0.0036
E18.5 retina
CATCTTTGGA
(
5
)
1.8
0.0018
P0.5 retina
GCCCCAGCCC (
13
)
2
0.002
P2.5 retina
GCCCCAGCCC (
13
)
5.3
0.0053
P2.5 retina
GGAAAGGGCT (
7
)
1.8
0.0018
P4.5 retina
GCCCCAGCCC (
13
)
5.9
0.0059
P6.5 retina
GCCCCAGCCC (
13
)
1.7
0.0017
P10.5 crx- retina
GCCCCAGCCC (
13
)
7.4
0.0074
P10.5 crx- retina
GGAAAGGGCT (
7
)
1.9
0.0019
P10.5 crx- retina
TTGGTGGTCA
(
3
)
1.9
0.0019
P10.5 crx+ retina
GCCCCAGCCC (
13
)
7.7
0.0077
P10.5 crx+ retina
TTGGTGGTCA
(
3
)
3.8
0.0038
Adult retinal
GCCCCAGCCC (
13
)
3.7
0.0037
Adult retinal
TTGGTGGTCA
(
3
)
1.9
0.0019
ONL
GCCCCAGCCC (
13
)
1.9
0.0019
