Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.194116	Col27a1	procollagen, type XXVII, alpha 1	4		373864
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	COL27A1[collagen, type XXVII, alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC GGCTTGCCTG (2) 3.3 0.0033 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma CCACCTAAAC 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture GGCTTGCCTG (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture GGCTTGCCTG (2) 1.2 0.0012 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 Hypothalamus GAAAAAAAAA (204) 67 0.067 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina GGCTTGCCTG (2) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina GGCTTGCCTG (2) 1.8 0.0018 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina GGCTTGCCTG (2) 3.9 0.0039 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina GGCTTGCCTG (2) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina GGCTTGCCTG (2) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal CCACCTAAAC 3.7 0.0037 Adult retinal GGCTTGCCTG (2) 3.7 0.0037 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL CCACCTAAAC 1.9 0.0019