Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.194116	Col27a1	procollagen, type XXVII, alpha 1	4		373864
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	COL27A1[collagen, type XXVII, alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAAAAAAA (2) GGCTTGCCTG 49 0.049 Cb medulloblastoma CCACCTAAAC GAAAAAAAAA (2) 175.7 0.1757 P8 GC+1d culture GAAAAAAAAA (2) GGCTTGCCTG 42.2 0.0422 P8 GC+SHH+1d culture GAAAAAAAAA (2) GGCTTGCCTG 78.5 0.0785 E15 cortex GAAAAAAAAA (2) 54.4 0.0544 P1 cortex GAAAAAAAAA (2) 45.5 0.0455 Hypothalamus GAAAAAAAAA (2) 67 0.067 E12.5 retina GAAAAAAAAA (2) 46.9 0.0469 E14.5 retina GAAAAAAAAA (2) 34.6 0.0346 E16.5 retina GAAAAAAAAA (2) GGCTTGCCTG 25.3 0.0253 E18.5 retina GAAAAAAAAA (2) GGCTTGCCTG 67.3 0.0673 P0.5 retina GAAAAAAAAA (2) GGCTTGCCTG 39.2 0.0392 P2.5 retina GAAAAAAAAA (2) GGCTTGCCTG 88 0.088 P4.5 retina GAAAAAAAAA (2) 51.5 0.0515 P6.5 retina GAAAAAAAAA (2) GGCTTGCCTG 41.7 0.0417 P10.5 crx- retina GAAAAAAAAA (2) 16.7 0.0167 P10.5 crx+ retina GAAAAAAAAA (2) 42.3 0.0423 Adult retinal CCACCTAAAC GAAAAAAAAA (2) GGCTTGCCTG 24.1 0.0241 ONL CCACCTAAAC GAAAAAAAAA (2) 26.8 0.0268