Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1948	Tctex1	t-complex testis expressed 1	17	17 A1 (17 3.1 cM)	21648
Gene Ontology	axonemal dynein complex | cytoplasmic dynein complex | cytoplasmic dynein complex | dynein complex | Golgi apparatus | microtubule-based process | motor activity | protein binding
Human Homolog	TCTEL1[t-complex-associated-testis-expressed 1-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 150 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTTCAGCCA (2) 22.8 0.0228 P8 Cb GC TCTGCCCTCT (3) 13.1 0.0131 P8 Cb GC CAGAAGAACG (2) 3.3 0.0033 P8 Cb GC GGATCATTTA (4) 3.3 0.0033 P8 Cb GC ACCAAGGCAA (29) 1.6 0.0016 P8 Cb GC CTCCTGCCTT (10) 1.6 0.0016 P8 Cb GC GTGTCTGTTC (9) 1.6 0.0016 P8 Cb GC TACTGCATCG 1.6 0.0016 P8 Cb GC TCGGCCGCCC (15) 1.6 0.0016 Cb medulloblastoma TCTGCCCTCT (3) 69.4 0.0694 Cb medulloblastoma GTCTCTGCAT (3) 4.6 0.0046 Cb medulloblastoma ACCAAGGCAA (29) 2.3 0.0023 Cb medulloblastoma ACTTCAGCCA (2) 2.3 0.0023 Cb medulloblastoma CAAAAAAAAG (9) 2.3 0.0023 Cb medulloblastoma CTCCTGCCTT (10) 2.3 0.0023 Cb medulloblastoma TGGTTCCTGT (2) 2.3 0.0023 P8 GC+1d culture ACTTCAGCCA (2) 59.4 0.0594 P8 GC+1d culture TCTGCCCTCT (3) 20.5 0.0205 P8 GC+1d culture ACCAAGGCAA (29) 3.4 0.0034 P8 GC+1d culture CAAAAAAAAG (9) 2.3 0.0023 P8 GC+1d culture TGGTTCCTGT (2) 2.3 0.0023 P8 GC+1d culture CAGAAGAACG (2) 1.1 0.0011 P8 GC+1d culture CCATCTCTGT (4) 1.1 0.0011 P8 GC+1d culture CTCCTGCCTT (10) 1.1 0.0011 P8 GC+1d culture GTCTTGTGTG (2) 1.1 0.0011 P8 GC+1d culture GTCTTGTTCT 1.1 0.0011 P8 GC+1d culture GTGTCTGTTC (9) 1.1 0.0011 P8 GC+1d culture TACTGCATCG 1.1 0.0011 P8 GC+1d culture TATAGTGACA (7) 1.1 0.0011 P8 GC+SHH+1d culture ACTTCAGCCA (2) 44.5 0.0445 P8 GC+SHH+1d culture TCTGCCCTCT (3) 14.1 0.0141 P8 GC+SHH+1d culture CAGAAGAACG (2) 2.3 0.0023 P8 GC+SHH+1d culture CTCCTGCCTT (10) 2.3 0.0023 P8 GC+SHH+1d culture TCGGCCGCCC (15) 2.3 0.0023 P8 GC+SHH+1d culture TGGTTCCTGT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGATCATTTA (4) 1.2 0.0012 P8 GC+SHH+1d culture GTCTCTGCAT (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGTCTGTTC (9) 1.2 0.0012 P8 GC+SHH+1d culture TTAAAAGAAA (5) 1.2 0.0012 3T3 fibroblasts ACTTCAGCCA (2) 10.5 0.0105 3T3 fibroblasts CTCCTGCCTT (10) 7 0.007 3T3 fibroblasts GTCTTGTGTG (2) 7 0.007 3T3 fibroblasts GTGTCTGTTC (9) 3.5 0.0035 E15 cortex ACTTCAGCCA (2) 24.7 0.0247 E15 cortex TCTGCCCTCT (3) 19.8 0.0198 E15 cortex ACCAAGGCAA (29) 4.9 0.0049 E15 cortex CTCCTGCCTT (10) 4.9 0.0049 P1 cortex TCTGCCCTCT (3) 40.9 0.0409 P1 cortex GTGTCTGTTC (9) 9.1 0.0091 P1 cortex ACTTCAGCCA (2) 4.5 0.0045 P1 cortex CAGAAGAACG (2) 4.5 0.0045 P1 cortex GGAAGTCCTC (5) 4.5 0.0045 P1 cortex TTAAAAGAAA (5) 4.5 0.0045 Hypothalamus TCTGCCCTCT (3) 27.2 0.0272 Hypothalamus ACTTCAGCCA (2) 7.2 0.0072 Hypothalamus CTCCTGCCTT (10) 1.8 0.0018 Hypothalamus GTGTCTGTTC (9) 1.8 0.0018 Hypothalamus TATAGTGACA (7) 1.8 0.0018 E12.5 retina ACTTCAGCCA (2) 16.9 0.0169 E12.5 retina CTCCTGCCTT (10) 5.6 0.0056 E12.5 retina GTCTTGTGTG (2) 1.9 0.0019 E12.5 retina GTGTCTGTTC (9) 1.9 0.0019 E12.5 retina TCTGCCCTCT (3) 1.9 0.0019 E14.5 retina ACTTCAGCCA (2) 32.8 0.0328 E14.5 retina ACCAAGGCAA (29) 14.6 0.0146 E14.5 retina GTGTCTGTTC (9) 10.9 0.0109 E14.5 retina CAGAAGAACG (2) 3.6 0.0036 E14.5 retina CTCCTGCCTT (10) 3.6 0.0036 E14.5 retina TCGGCCGCCC (15) 3.6 0.0036 E14.5 retina GTCTTGTTCT 1.8 0.0018 E14.5 retina TCTGCCCTCT (3) 1.8 0.0018 E14.5 retina TGGTTCCTGT (2) 1.8 0.0018 E16.5 retina ACTTCAGCCA (2) 30.8 0.0308 E16.5 retina CAGAAGAACG (2) 9.1 0.0091 E16.5 retina TCTGCCCTCT (3) 9.1 0.0091 E16.5 retina CTCCTGCCTT (10) 7.2 0.0072 E16.5 retina GGAAGTCCTC (5) 5.4 0.0054 E16.5 retina GTGTCTGTTC (9) 5.4 0.0054 E16.5 retina ATTCCCCAGT (3) 1.8 0.0018 E16.5 retina CCATCTCTGT (4) 1.8 0.0018 E16.5 retina GGATCATTTA (4) 1.8 0.0018 E16.5 retina TACTGCATCG 1.8 0.0018 E18.5 retina TCTGCCCTCT (3) 9.1 0.0091 E18.5 retina ACTTCAGCCA (2) 7.3 0.0073 E18.5 retina CTCCTGCCTT (10) 5.5 0.0055 E18.5 retina GTGTCTGTTC (9) 5.5 0.0055 E18.5 retina ACCAAGGCAA (29) 1.8 0.0018 E18.5 retina CAAAAAAAAG (9) 1.8 0.0018 E18.5 retina TGGTTCCTGT (2) 1.8 0.0018 P0.5 retina ACTTCAGCCA (2) 29.4 0.0294 P0.5 retina TCTGCCCTCT (3) 13.7 0.0137 P0.5 retina ACCAAGGCAA (29) 3.9 0.0039 P0.5 retina CAAAAAAAAG (9) 3.9 0.0039 P0.5 retina GGAAGTCCTC (5) 2 0.002 P0.5 retina TGGTTCCTGT (2) 2 0.002 P2.5 retina ACTTCAGCCA (2) 17.6 0.0176 P2.5 retina TCTGCCCTCT (3) 15.8 0.0158 P2.5 retina GTGTCTGTTC (9) 5.3 0.0053 P2.5 retina CTCCTGCCTT (10) 3.5 0.0035 P2.5 retina ACCAAGGCAA (29) 1.8 0.0018 P2.5 retina GTCTTGTGTG (2) 1.8 0.0018 P2.5 retina TATAGTGACA (7) 1.8 0.0018 P2.5 retina TGGTTCCTGT (2) 1.8 0.0018 P4.5 retina ACTTCAGCCA (2) 17.8 0.0178 P4.5 retina TCTGCCCTCT (3) 15.9 0.0159 P4.5 retina GTGTCTGTTC (9) 4 0.004 P4.5 retina CAGAAGAACG (2) 2 0.002 P4.5 retina CTCCTGCCTT (10) 2 0.002 P4.5 retina TGGTTCCTGT (2) 2 0.002 P6.5 retina TCTGCCCTCT (3) 50 0.05 P6.5 retina ACTTCAGCCA (2) 25 0.025 P6.5 retina CTCCTGCCTT (10) 10 0.01 P6.5 retina ACCAAGGCAA (29) 1.7 0.0017 P6.5 retina CAGAAGAACG (2) 1.7 0.0017 P6.5 retina GTCTTGTGTG (2) 1.7 0.0017 P6.5 retina GTGTCTGTTC (9) 1.7 0.0017 P6.5 retina TCGGCCGCCC (15) 1.7 0.0017 P10.5 crx- retina ACTTCAGCCA (2) 189.5 0.1895 P10.5 crx- retina TCTGCCCTCT (3) 31.6 0.0316 P10.5 crx- retina CTCCTGCCTT (10) 13 0.013 P10.5 crx- retina GTCTCTGCAT (3) 3.7 0.0037 P10.5 crx- retina TGGTTCCTGT (2) 3.7 0.0037 P10.5 crx- retina ATTCCCCAGT (3) 1.9 0.0019 P10.5 crx- retina CAGAAGAACG (2) 1.9 0.0019 P10.5 crx- retina TACTGCATCG 1.9 0.0019 P10.5 crx+ retina ACTTCAGCCA (2) 46.1 0.0461 P10.5 crx+ retina TCTGCCCTCT (3) 42.3 0.0423 P10.5 crx+ retina CTCCTGCCTT (10) 7.7 0.0077 P10.5 crx+ retina ACCAAGGCAA (29) 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAG (9) 1.9 0.0019 P10.5 crx+ retina GTCTCTGCAT (3) 1.9 0.0019 P10.5 crx+ retina GTGTCTGTTC (9) 1.9 0.0019 P10.5 crx+ retina TGGTTCCTGT (2) 1.9 0.0019 Adult retinal TCTGCCCTCT (3) 37 0.037 Adult retinal ACTTCAGCCA (2) 9.3 0.0093 Adult retinal GGAAGTCCTC (5) 3.7 0.0037 Adult retinal GTGTCTGTTC (9) 3.7 0.0037 Adult retinal ACCAAGGCAA (29) 1.9 0.0019 Adult retinal CAAAAAAAAG (9) 1.9 0.0019 Adult retinal CCATCTCTGT (4) 1.9 0.0019 ONL TCTGCCCTCT (3) 26.8 0.0268 ONL GTGTCTGTTC (9) 13.4 0.0134 ONL ACTTCAGCCA (2) 11.5 0.0115 ONL ACCAAGGCAA (29) 9.6 0.0096 ONL CTCCTGCCTT (10) 7.7 0.0077 ONL GGCCCAATAA (4) 3.8 0.0038 ONL GTCTTGTGTG (2) 3.8 0.0038 ONL GTCTTGTTCT 3.8 0.0038 ONL CAGAAGAACG (2) 1.9 0.0019 ONL TTAAAAGAAA (5) 1.9 0.0019