Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196173	Actg1	actin, gamma, cytoplasmic 1	11		11465
Gene Ontology	cytoskeleton | cytoskeleton organization and biogenesis | structural constituent of cytoskeleton
Human Homolog	ACTG1[actin, gamma 1] | ACTG1[actin, gamma 1] | ACTG1[actin, gamma 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 79 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGCTCGGTC (3) 110.9 0.1109 P8 Cb GC AAGATCCTGA (2) 6.5 0.0065 P8 Cb GC GACTCTGGTG (2) 6.5 0.0065 P8 Cb GC TGCAAAGCCG (2) 4.9 0.0049 P8 Cb GC GGCCAGAAAG (2) 1.6 0.0016 Cb medulloblastoma TGGCTCGGTC (3) 53.2 0.0532 Cb medulloblastoma AAGATCCTGA (2) 2.3 0.0023 Cb medulloblastoma GGGCGGGAAG (4) 2.3 0.0023 Cb medulloblastoma TGTAAAGAAA 2.3 0.0023 P8 GC+1d culture TGGCTCGGTC (3) 207.8 0.2078 P8 GC+1d culture GGGCGGGAAG (4) 3.4 0.0034 P8 GC+1d culture TGGTTCGGTC 2.3 0.0023 P8 GC+1d culture TGTAAAGAAA 2.3 0.0023 P8 GC+1d culture GACTCTGGTG (2) 1.1 0.0011 P8 GC+1d culture GCACCCCCGG 1.1 0.0011 P8 GC+SHH+1d culture TGGCTCGGTC (3) 110.1 0.1101 P8 GC+SHH+1d culture GGGCGGGAAG (4) 2.3 0.0023 P8 GC+SHH+1d culture AAGATCCTGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GCTACTGCCT 1.2 0.0012 P8 GC+SHH+1d culture GGCCAGAAAG (2) 1.2 0.0012 P8 GC+SHH+1d culture TCCAGATGCG 1.2 0.0012 3T3 fibroblasts TGGCTCGGTC (3) 301.4 0.3014 3T3 fibroblasts AAGATCCTGA (2) 3.5 0.0035 3T3 fibroblasts GCACCCCCGG 3.5 0.0035 E15 cortex TGGCTCGGTC (3) 217.7 0.2177 E15 cortex AAGATCCTGA (2) 4.9 0.0049 E15 cortex GCTACTGCCT 4.9 0.0049 P1 cortex TGGCTCGGTC (3) 113.6 0.1136 P1 cortex AAGGGGGAAG 4.5 0.0045 P1 cortex GGCCAGAAAG (2) 4.5 0.0045 Hypothalamus TGGCTCGGTC (3) 41.7 0.0417 Hypothalamus AAGATCCTGA (2) 1.8 0.0018 Hypothalamus TGGTTCGGTC 1.8 0.0018 Hypothalamus TGTAAAGAAA 1.8 0.0018 E12.5 retina TGGCTCGGTC (3) 26.3 0.0263 E12.5 retina GCACCCCCGG 1.9 0.0019 E12.5 retina GCTACTGCCT 1.9 0.0019 E14.5 retina TGGCTCGGTC (3) 34.6 0.0346 E14.5 retina AAGATCCTGA (2) 1.8 0.0018 E14.5 retina GCTACTGCCT 1.8 0.0018 E14.5 retina GGGCAAACAC 1.8 0.0018 E16.5 retina TGGCTCGGTC (3) 38 0.038 E16.5 retina TGTAAAGAAA 3.6 0.0036 E16.5 retina AAGGGGGAAG 1.8 0.0018 E16.5 retina GACTCTGGTG (2) 1.8 0.0018 E16.5 retina GGGCGGGAAG (4) 1.8 0.0018 E18.5 retina TGGCTCGGTC (3) 18.2 0.0182 E18.5 retina GGTCAGAAAG 5.5 0.0055 E18.5 retina GACTCTGGTG (2) 1.8 0.0018 E18.5 retina TGGTTCGGTC 1.8 0.0018 P0.5 retina TGGCTCGGTC (3) 149.2 0.1492 P0.5 retina GCACCCCCGG 2 0.002 P0.5 retina GGTCAGAAAG 2 0.002 P0.5 retina TGTAAAGAAA 2 0.002 P2.5 retina TGGCTCGGTC (3) 31.7 0.0317 P2.5 retina AAGGGGGAAG 1.8 0.0018 P2.5 retina GGGCGGGAAG (4) 1.8 0.0018 P4.5 retina TGGCTCGGTC (3) 29.7 0.0297 P4.5 retina GGTCAGAAAG 4 0.004 P4.5 retina TGGTTCGGTC 2 0.002 P6.5 retina TGGCTCGGTC (3) 51.7 0.0517 P6.5 retina ACGGTCCGGT 5 0.005 P6.5 retina GCACCCCCGG 1.7 0.0017 P6.5 retina GGCCAGAAAG (2) 1.7 0.0017 P10.5 crx- retina TGGCTCGGTC (3) 65 0.065 P10.5 crx- retina AAGGGGGAAG 3.7 0.0037 P10.5 crx- retina ACGGTCCGGT 3.7 0.0037 P10.5 crx+ retina TGGCTCGGTC (3) 42.3 0.0423 P10.5 crx+ retina ACGGTCCGGT 3.8 0.0038 P10.5 crx+ retina GGGCGGGAAG (4) 1.9 0.0019 P10.5 crx+ retina TCCAGATGCG 1.9 0.0019 P10.5 crx+ retina TGTAAAGAAA 1.9 0.0019 Adult retinal TGGCTCGGTC (3) 53.7 0.0537 Adult retinal ACGGTCCGGT 3.7 0.0037 Adult retinal TCCAGATGCG 1.9 0.0019 Adult retinal TGGTTCGGTC 1.9 0.0019 ONL GGGCAAACAC 3.8 0.0038 ONL TGGCTCGGTC (3) 3.8 0.0038 ONL TGTAAAGAAA 1.9 0.0019