Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196173	Actg1	actin, gamma, cytoplasmic 1	11		11465
Gene Ontology	cytoskeleton | cytoskeleton organization and biogenesis | structural constituent of cytoskeleton
Human Homolog	ACTG1[actin, gamma 1] | ACTG1[actin, gamma 1] | ACTG1[actin, gamma 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 265 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACTGGAAT (2) AAAGAGGGGA (2) AAGATCCTGA (2) AAGATGCTGA (4) AGACCAGCCT AGATCTGATG CAGTCTGTGG GACAAGATCT GACTCTGGTG (2) GAGAAAAGAT (2) GAGAAGATCT (2) GAGAAGTCTG GCAGCCTGGG GGCCAGAAAG (2) GTACTGGTGG (2) TACCCAGGCA (2) TACCCCAGGC (2) TGCAAAGCCG (2) TGGCTCGGTC (3) 202.2 0.2022 Cb medulloblastoma AAAAAAAACA AAACTGGAAT (2) AAGATCCTGA (2) AAGATCCTGG (2) AGTGGATGTG (2) GACACTTTTT GAGAAGATCT (2) GAGAAGTCTG GCAGCCTGGG GGGCGGGAAG (4) GTAACGTGGG (2) GTACTGGTGG (2) TGGCTCGGTC (3) TGTAAAGAAA 90 0.09 P8 GC+1d culture AAAAGGGGAA AAACTGGAAT (2) AAAGAGGGGA (2) AGAAAGAATT AGACAGAAAG (4) AGATCTGATG CAGTCTGTGG CCATCTGGGG GACAAGATCT GACTCTGGTG (2) GAGAAAAGAT (2) GAGAAGTCTG GCACCCCCGG GGGCGGGAAG (4) GTAACGTGGG (2) TACCCAGGCA (2) TGGCTCGGTC (3) TGGTTCGGTC TGTAAAGAAA 247.4 0.2474 P8 GC+SHH+1d culture AAAAGGGGAA AAACTGGAAT (2) AAGATCCTGA (2) AGATCTGATG CAGTCTGTGG CCATCTGGGG GACACTTTTT GAGAAAAGAT (2) GAGAAGATCT (2) GAGAAGTCTG GCAGCCTGGG GCTACTGCCT GGCCAGAAAG (2) GGGCGGGAAG (4) GTAACGTGGG (2) TCCAGATGCG TGGCTCGGTC (3) 161.7 0.1617 3T3 fibroblasts AAGATCCTGA (2) AGTGGATGTG (2) CAGTCTGTGG GAGAAGATCT (2) GAGAAGTCTG GCACCCCCGG GTCATAGCTG (2) TGGCTCGGTC (3) 343.4 0.3434 E15 cortex AAACTGGAAT (2) AAAGAGGGGA (2) AAGATCCTGA (2) AAGATGCTGA (4) AGACAGAAAG (4) GACACTTTTT GAGAAGATCT (2) GCTACTGCCT GTCATAGCTG (2) TACCCAGGCA (2) TGGCTCGGCA TGGCTCGGTC (3) 296.4 0.2964 P1 cortex AAGGGGGAAG AGAAAGAATT GGAGTCCCGG (2) GGCCAGAAAG (2) TGGCTCGGCA TGGCTCGGTC (3) 140.7 0.1407 Hypothalamus AAACTGGAAT (2) AAGATCCTGA (2) AAGATCCTGG (2) AGATCTGATG AGTGGATGTG (2) CAGTCTGTGG CCATCTGGGG GAGAAGATCT (2) GAGAAGTCTG GCAGCCTGGG GTACTGGTGG (2) TACCCCAGGC (2) TGGCTCGGTC (3) TGGTTCGGTC TGTAAAGAAA 79.5 0.0795 E12.5 retina AAACAAAAGA (2) AAACTGGAAT (2) GAGAAGTCTG GCACCCCCGG GCTACTGCCT GTAACGTGGG (2) TGGCTCGGTC (3) 43.3 0.0433 E14.5 retina AAACAAAAGA (2) AAACTGGAAT (2) AAGATCCTGA (2) AAGATCCTGG (2) GACAAGATCT GAGAAGTCTG GCTACTGCCT GGGCAAACAC TACCCAGGCA (2) TGGCTCGGTC (3) 61.7 0.0617 E16.5 retina AAAAAAAACA AAACTGGAAT (2) AAAGAGGGGA (2) AAGATGCTGA (4) AAGGGGGAAG GAAATGTGAT GACAAGATCT GACACTTTTT GACTCTGGTG (2) GAGAAGTCTG GCAGCCTGGG GGAGTCCCGG (2) GGGCGGGAAG (4) TACCCAGGCA (2) TGGCTCGGTC (3) TGTAAAGAAA 106.7 0.1067 E18.5 retina AAAAAAAACA AAACAAAAGA (2) AAACTGGAAT (2) AAAGAGGGGA (2) AAGATCCTGG (2) AGATCTGATG GACAAGATCT GACACTTTTT GACTCTGGTG (2) GAGAAGTCTG GCAGCCTGGG GGTCAGAAAG TACCCAGGCA (2) TACCCCAGGC (2) TGGCTCGGTC (3) TGGTTCGGTC 63.4 0.0634 P0.5 retina AAACTGGAAT (2) AGACAGAAAG (4) AGATCTGATG AGTGGATGTG (2) CAGTCTGTGG CCATCTGGGG GAGAAGTCTG GCACCCCCGG GGTCAGAAAG GTCATAGCTG (2) TACCCAGGCA (2) TGGCTCGGTC (3) TGTAAAGAAA 192.5 0.1925 P2.5 retina AAAGAGGGGA (2) AAAGATCCCT (3) AAGATGCTGA (4) AAGGGGGAAG AGACAGAAAG (4) AGACCAGCCT AGTGGATGTG (2) CAGTCTGTGG GAGAAGTCTG GCAGCCTGGG GGGCGGGAAG (4) GTAACGTGGG (2) GTCATAGCTG (2) TGGCTCGGTC (3) 72.5 0.0725 P4.5 retina AAAAAAAACA AAACTGGAAT (2) AAATGGAAAA (2) AAGATGCTGA (4) CCATCTGGGG GAAATGTGAT GACACTTTTT GAGAAGTCTG GCAGCCTGGG GGAGTCCCGG (2) GGTCAGAAAG GTAACGTGGG (2) GTCATAGCTG (2) TGGCTCGGTC (3) TGGTTCGGTC 77.4 0.0774 P6.5 retina AAACTGGAAT (2) AAGATGCTGA (4) ACGGTCCGGT AGACAGAAAG (4) AGATCTGATG CAGTCTGTGG GAGAAGATCT (2) GAGAAGTCTG GCACCCCCGG GGCCAGAAAG (2) GTACTGGTGG (2) GTCATAGCTG (2) TACCCAGGCA (2) TGGCTCGGTC (3) 90.1 0.0901 P10.5 crx- retina AAACTGGAAT (2) AAAGATCCCT (3) AAGATCCTGG (2) AAGGGGGAAG ACGGTCCGGT AGATCTGATG AGTGGATGTG (2) GAGAAGTCTG GTAACGTGGG (2) TGGCTCGGCA TGGCTCGGTC (3) 96.8 0.0968 P10.5 crx+ retina AAAAAAAACA AAAGAGGGGA (2) AAGATGCTGA (4) ACGGTCCGGT AGATCTGATG CAGTCTGTGG GAGAAGATCT (2) GAGAAGTCTG GCAGCCTGGG GGGCGGGAAG (4) TACCCAGGCA (2) TCCAGATGCG TGGCTCGGTC (3) TGTAAAGAAA 74.6 0.0746 Adult retinal AAAGATCCCT (3) AAGATCCTGG (2) AAGATGCTGA (4) ACGGTCCGGT AGAAAGAATT CCATCTGGGG GAAATGTGAT GAGAAAAGAT (2) GAGAAGTCTG GTCATAGCTG (2) TCCAGATGCG TGGCTCGGTC (3) TGGTTCGGTC 81.9 0.0819 ONL AAAAAAAACA AAATGGAAAA (2) AAGATCCTGG (2) AGACAGAAAG (4) AGACCAGCCT AGATCTGATG CCATCTGGGG GGAGTCCCGG (2) GGGCAAACAC GTCATAGCTG (2) TGGCTCGGTC (3) TGTAAAGAAA 41.8 0.0418