Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196239	Map1lc3a	microtubule-associated protein 1 light chain 3 alpha	2		66734
Human Homolog	MAP1LC3A[microtubule-associated protein 1 light chain 3 alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCGGGTTGC (2) 8.2 0.0082 P8 Cb GC GTGAGCGTCT 3.3 0.0033 P8 Cb GC AGCGAGTTGG (2) 1.6 0.0016 P8 Cb GC GTCTACGCCT 1.6 0.0016 Cb medulloblastoma TTCGGGTTGC (2) 4.6 0.0046 Cb medulloblastoma AGCGAGTTGG (2) 2.3 0.0023 Cb medulloblastoma GTGAGCGTCT 2.3 0.0023 P8 GC+1d culture TTCGGGTTGC (2) 45.7 0.0457 P8 GC+1d culture GTCTACGCCT 1.1 0.0011 P8 GC+SHH+1d culture TTCGGGTTGC (2) 19.9 0.0199 3T3 fibroblasts TTCGGGTTGC (2) 10.5 0.0105 3T3 fibroblasts GTCTACGCCT 3.5 0.0035 E15 cortex CTGGAAAAAA (10) 4.9 0.0049 E15 cortex GAGAGGGCTT (3) 4.9 0.0049 P1 cortex TTCGGGTTGC (2) 22.7 0.0227 P1 cortex TCTTCATCCT (5) 9.1 0.0091 P1 cortex GTCTACGCCT 4.5 0.0045 Hypothalamus TTCGGGTTGC (2) 23.5 0.0235 Hypothalamus GTCTACGCCT 5.4 0.0054 Hypothalamus AGCGAGTTGG (2) 1.8 0.0018 Hypothalamus GAGAGGGCTT (3) 1.8 0.0018 E12.5 retina TTCGGGTTGC (2) 9.4 0.0094 E12.5 retina CTGGAAAAAA (10) 1.9 0.0019 E14.5 retina TTCGGGTTGC (2) 12.8 0.0128 E14.5 retina TCTTCATCCT (5) 1.8 0.0018 E16.5 retina TTCGGGTTGC (2) 12.7 0.0127 E18.5 retina TTCGGGTTGC (2) 3.6 0.0036 E18.5 retina CTGGAAAAAA (10) 1.8 0.0018 P0.5 retina TTCGGGTTGC (2) 17.7 0.0177 P0.5 retina CTGGAAAAAA (10) 2 0.002 P2.5 retina TTCGGGTTGC (2) 17.6 0.0176 P4.5 retina TTCGGGTTGC (2) 9.9 0.0099 P4.5 retina CTGGAAAAAA (10) 2 0.002 P6.5 retina TTCGGGTTGC (2) 28.3 0.0283 P10.5 crx- retina TTCGGGTTGC (2) 26 0.026 P10.5 crx- retina GTCTACGCCT 1.9 0.0019 P10.5 crx+ retina TTCGGGTTGC (2) 9.6 0.0096 P10.5 crx+ retina GTCTACGCCT 1.9 0.0019 Adult retinal TTCGGGTTGC (2) 14.8 0.0148 ONL TTCGGGTTGC (2) 3.8 0.0038 ONL CTGGAAAAAA (10) 1.9 0.0019 ONL GAGAGGGCTT (3) 1.9 0.0019