Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196239	Map1lc3a	microtubule-associated protein 1 light chain 3 alpha	2		66734
Human Homolog	MAP1LC3A[microtubule-associated protein 1 light chain 3 alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCGGGTTGC 8.2 0.0082 P8 Cb GC GTGAGCGTCT 3.3 0.0033 P8 Cb GC AGCGAGTTGG 1.6 0.0016 P8 Cb GC GTCTACGCCT 1.6 0.0016 Cb medulloblastoma TTCGGGTTGC 4.6 0.0046 Cb medulloblastoma AGCGAGTTGG 2.3 0.0023 Cb medulloblastoma GTGAGCGTCT 2.3 0.0023 P8 GC+1d culture TTCGGGTTGC 45.7 0.0457 P8 GC+1d culture GTCTACGCCT 1.1 0.0011 P8 GC+SHH+1d culture TTCGGGTTGC 19.9 0.0199 3T3 fibroblasts TTCGGGTTGC 10.5 0.0105 3T3 fibroblasts GTCTACGCCT 3.5 0.0035 P1 cortex TTCGGGTTGC 22.7 0.0227 P1 cortex GTCTACGCCT 4.5 0.0045 Hypothalamus TTCGGGTTGC 23.5 0.0235 Hypothalamus GTCTACGCCT 5.4 0.0054 Hypothalamus AGCGAGTTGG 1.8 0.0018 E12.5 retina TTCGGGTTGC 9.4 0.0094 E14.5 retina TTCGGGTTGC 12.8 0.0128 E16.5 retina TTCGGGTTGC 12.7 0.0127 E18.5 retina TTCGGGTTGC 3.6 0.0036 P0.5 retina TTCGGGTTGC 17.7 0.0177 P2.5 retina TTCGGGTTGC 17.6 0.0176 P4.5 retina TTCGGGTTGC 9.9 0.0099 P6.5 retina TTCGGGTTGC 28.3 0.0283 P10.5 crx- retina TTCGGGTTGC 26 0.026 P10.5 crx- retina GTCTACGCCT 1.9 0.0019 P10.5 crx+ retina TTCGGGTTGC 9.6 0.0096 P10.5 crx+ retina GTCTACGCCT 1.9 0.0019 Adult retinal TTCGGGTTGC 14.8 0.0148 ONL TTCGGGTTGC 3.8 0.0038