Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196581	Mapk1	mitogen activated protein kinase 1	16	16 A1 (16 9.82 cM)	26413
Gene Ontology	ATP binding | cell cycle | cytoplasm | kinase activity | MAP kinase activity | MAP kinase activity | nucleus | organogenesis | phosphorylation | phosphotyrosine binding | protein amino acid phosphorylation | protein amino acid phosphorylation | protein binding | protein kinase activity | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | signal transduction | transferase activity
Human Homolog	MAPK1[mitogen-activated protein kinase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 142 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATGAAAATG (6) 21.2 0.0212 P8 Cb GC AAATAAAGTC (3) 8.2 0.0082 P8 Cb GC GCGGCGGCGG (24) 6.5 0.0065 P8 Cb GC GAAATAAATG (7) 4.9 0.0049 P8 Cb GC TTTCTAAAAA (7) 4.9 0.0049 P8 Cb GC AAGAGAATGC (2) 3.3 0.0033 P8 Cb GC AAATAAAGTG (5) 1.6 0.0016 P8 Cb GC AAGAAGATAG (2) 1.6 0.0016 P8 Cb GC CAAGAGCCCA (2) 1.6 0.0016 Cb medulloblastoma TATGAAAATG (6) 18.5 0.0185 Cb medulloblastoma GAAATAAATG (7) 16.2 0.0162 Cb medulloblastoma AAATAAAGTC (3) 4.6 0.0046 Cb medulloblastoma GCGGCGGCGG (24) 4.6 0.0046 Cb medulloblastoma TGACATTTTA (7) 4.6 0.0046 Cb medulloblastoma AAGAGAATGC (2) 2.3 0.0023 Cb medulloblastoma GCTCTGTATC 2.3 0.0023 Cb medulloblastoma TTTCTAAAAA (7) 2.3 0.0023 P8 GC+1d culture TATGAAAATG (6) 29.7 0.0297 P8 GC+1d culture AAATAAAGTC (3) 8 0.008 P8 GC+1d culture GAAATAAATG (7) 6.8 0.0068 P8 GC+1d culture GCGGCGGCGG (24) 4.6 0.0046 P8 GC+1d culture GCTCTGTATC 2.3 0.0023 P8 GC+1d culture AAATAAAGTG (5) 1.1 0.0011 P8 GC+1d culture AAGCTCTGCT 1.1 0.0011 P8 GC+1d culture TCAGAACTTT 1.1 0.0011 P8 GC+1d culture TTTCTAAAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture TATGAAAATG (6) 18.7 0.0187 P8 GC+SHH+1d culture GCGGCGGCGG (24) 16.4 0.0164 P8 GC+SHH+1d culture GAAATAAATG (7) 11.7 0.0117 P8 GC+SHH+1d culture AAATAAAGTC (3) 8.2 0.0082 P8 GC+SHH+1d culture TTTCTAAAAA (7) 5.9 0.0059 P8 GC+SHH+1d culture AAGAAGATAG (2) 3.5 0.0035 P8 GC+SHH+1d culture GCTCTGTATC 2.3 0.0023 P8 GC+SHH+1d culture ATCACACAGG 1.2 0.0012 3T3 fibroblasts CAAGAGCACA (5) 3.5 0.0035 3T3 fibroblasts CAAGAGCCCA (2) 3.5 0.0035 3T3 fibroblasts GCGGCGGCGG (24) 3.5 0.0035 3T3 fibroblasts GCTCTGTATC 3.5 0.0035 3T3 fibroblasts TATGAAAATG (6) 3.5 0.0035 E15 cortex GCTCTGTATC 4.9 0.0049 E15 cortex TATGAAAATG (6) 4.9 0.0049 P1 cortex AAATAAAGTC (3) 9.1 0.0091 P1 cortex GAAATAAATG (7) 4.5 0.0045 P1 cortex GCTCTGTATC 4.5 0.0045 P1 cortex TATGAAAATG (6) 4.5 0.0045 P1 cortex TTTCTAAAAA (7) 4.5 0.0045 Hypothalamus TATGAAAATG (6) 23.5 0.0235 Hypothalamus AAATAAAGTC (3) 12.7 0.0127 Hypothalamus GAAATAAATG (7) 10.9 0.0109 Hypothalamus GCGGCGGCGG (24) 7.2 0.0072 Hypothalamus AAGAGAATGC (2) 3.6 0.0036 Hypothalamus TCAGAACTTT 1.8 0.0018 E12.5 retina AAATAAAGTC (3) 24.4 0.0244 E12.5 retina GCGGCGGCGG (24) 15 0.015 E12.5 retina GAAATAAATG (7) 7.5 0.0075 E12.5 retina TATGAAAATG (6) 7.5 0.0075 E12.5 retina TTCAGGGCAG 5.6 0.0056 E12.5 retina TTTCTAAAAA (7) 3.8 0.0038 E12.5 retina AAGAGAATGC (2) 1.9 0.0019 E12.5 retina AAGCTCTGCT 1.9 0.0019 E12.5 retina ATCACACAGG 1.9 0.0019 E14.5 retina AAATAAAGTC (3) 36.4 0.0364 E14.5 retina TATGAAAATG (6) 21.9 0.0219 E14.5 retina GAAATAAATG (7) 16.4 0.0164 E14.5 retina TTTCTAAAAA (7) 7.3 0.0073 E14.5 retina GCGGCGGCGG (24) 5.5 0.0055 E14.5 retina AAGAGAATGC (2) 1.8 0.0018 E14.5 retina ATCACACAGG 1.8 0.0018 E14.5 retina CAAGAGCACA (5) 1.8 0.0018 E16.5 retina AAATAAAGTC (3) 39.8 0.0398 E16.5 retina TATGAAAATG (6) 38 0.038 E16.5 retina GCGGCGGCGG (24) 14.5 0.0145 E16.5 retina GAAATAAATG (7) 9.1 0.0091 E16.5 retina ATCACACAGG 3.6 0.0036 E16.5 retina CAAGAGCACA (5) 1.8 0.0018 E18.5 retina AAATAAAGTC (3) 40 0.04 E18.5 retina TATGAAAATG (6) 29.1 0.0291 E18.5 retina GAAATAAATG (7) 18.2 0.0182 E18.5 retina GCGGCGGCGG (24) 9.1 0.0091 E18.5 retina TTTCTAAAAA (7) 3.6 0.0036 E18.5 retina AAGAGAATGC (2) 1.8 0.0018 E18.5 retina CAAGAGCCCA (2) 1.8 0.0018 P0.5 retina AAATAAAGTC (3) 19.6 0.0196 P0.5 retina GCGGCGGCGG (24) 7.9 0.0079 P0.5 retina TATGAAAATG (6) 7.9 0.0079 P0.5 retina GCTCTGTATC 5.9 0.0059 P0.5 retina ATCACACAGG 3.9 0.0039 P0.5 retina GAAATAAATG (7) 3.9 0.0039 P0.5 retina AAGAAGATAG (2) 2 0.002 P0.5 retina AAGAGAATGC (2) 2 0.002 P2.5 retina AAATAAAGTC (3) 28.2 0.0282 P2.5 retina TATGAAAATG (6) 21.1 0.0211 P2.5 retina GAAATAAATG (7) 12.3 0.0123 P2.5 retina GCGGCGGCGG (24) 7 0.007 P2.5 retina TTTCTAAAAA (7) 3.5 0.0035 P2.5 retina CAAGAGCCCA (2) 1.8 0.0018 P2.5 retina GAATAAACTC 1.8 0.0018 P2.5 retina TCAGAACTTT 1.8 0.0018 P4.5 retina AAATAAAGTC (3) 35.7 0.0357 P4.5 retina GAAATAAATG (7) 19.8 0.0198 P4.5 retina TATGAAAATG (6) 11.9 0.0119 P4.5 retina TTTCTAAAAA (7) 7.9 0.0079 P4.5 retina GAATAAACTC 4 0.004 P4.5 retina GCGGCGGCGG (24) 4 0.004 P4.5 retina AAATAAAGTG (5) 2 0.002 P4.5 retina ATCACACAGG 2 0.002 P4.5 retina CAAGAGCACA (5) 2 0.002 P4.5 retina TGACATTTTA (7) 2 0.002 P6.5 retina AAATAAAGTC (3) 43.4 0.0434 P6.5 retina TATGAAAATG (6) 18.3 0.0183 P6.5 retina GAAATAAATG (7) 16.7 0.0167 P6.5 retina GCGGCGGCGG (24) 5 0.005 P6.5 retina GCTCTGTATC 5 0.005 P6.5 retina CAAGAGCCCA (2) 3.3 0.0033 P6.5 retina ATCACACAGG 1.7 0.0017 P6.5 retina TATGAAAACG (2) 1.7 0.0017 P6.5 retina TTTCTAAAAA (7) 1.7 0.0017 P10.5 crx- retina TATGAAAATG (6) 40.9 0.0409 P10.5 crx- retina AAATAAAGTC (3) 14.9 0.0149 P10.5 crx- retina GAAATAAATG (7) 7.4 0.0074 P10.5 crx- retina GCTCTGTATC 7.4 0.0074 P10.5 crx- retina CAAGAGCCCA (2) 3.7 0.0037 P10.5 crx- retina GCGGCGGCGG (24) 1.9 0.0019 P10.5 crx+ retina TATGAAAATG (6) 19.2 0.0192 P10.5 crx+ retina AAATAAAGTC (3) 15.4 0.0154 P10.5 crx+ retina GCGGCGGCGG (24) 15.4 0.0154 P10.5 crx+ retina GAAATAAATG (7) 7.7 0.0077 P10.5 crx+ retina ATCACACAGG 1.9 0.0019 P10.5 crx+ retina CAAGAGCCCA (2) 1.9 0.0019 P10.5 crx+ retina GCTCTGTATC 1.9 0.0019 P10.5 crx+ retina TGACATTTTA (7) 1.9 0.0019 Adult retinal GCGGCGGCGG (24) 16.7 0.0167 Adult retinal GAAATAAATG (7) 9.3 0.0093 Adult retinal TATGAAAATG (6) 9.3 0.0093 Adult retinal AAATAAAGTC (3) 3.7 0.0037 Adult retinal GCTCTGTATC 3.7 0.0037 Adult retinal TTTCTAAAAA (7) 1.9 0.0019 ONL TATGAAAATG (6) 19.2 0.0192 ONL GAAATAAATG (7) 11.5 0.0115 ONL GCGGCGGCGG (24) 9.6 0.0096 ONL AAGCTCTGCT 1.9 0.0019 ONL ATCACACAGG 1.9 0.0019