Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196581	Mapk1	mitogen activated protein kinase 1	16	16 A1 (16 9.82 cM)	26413
Gene Ontology	ATP binding | cell cycle | cytoplasm | kinase activity | MAP kinase activity | MAP kinase activity | nucleus | organogenesis | phosphorylation | phosphotyrosine binding | protein amino acid phosphorylation | protein amino acid phosphorylation | protein binding | protein kinase activity | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | signal transduction | transferase activity
Human Homolog	MAPK1[mitogen-activated protein kinase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 142 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAAAGTC AAATAAAGTG AAGAAGATAG AAGAGAATGC CAAGAGCCCA GAAATAAATG (4) GCGGCGGCGG (3) TATGAAAATG (2) TTTCTAAAAA (2) 53.8 0.0538 Cb medulloblastoma AAATAAAGTC AAGAGAATGC GAAATAAATG (4) GCGGCGGCGG (3) GCTCTGTATC TATGAAAATG (2) TGACATTTTA (3) TTTCTAAAAA (2) 55.4 0.0554 P8 GC+1d culture AAATAAAGTC AAATAAAGTG AAGCTCTGCT GAAATAAATG (4) GCGGCGGCGG (3) GCTCTGTATC TATGAAAATG (2) TCAGAACTTT TTTCTAAAAA (2) 55.8 0.0558 P8 GC+SHH+1d culture AAATAAAGTC AAGAAGATAG ATCACACAGG GAAATAAATG (4) GCGGCGGCGG (3) GCTCTGTATC TATGAAAATG (2) TTTCTAAAAA (2) 67.9 0.0679 3T3 fibroblasts CAAGAGCACA (3) CAAGAGCCCA GCGGCGGCGG (3) GCTCTGTATC TATGAAAATG (2) 17.5 0.0175 E15 cortex GCTCTGTATC TATGAAAATG (2) 9.8 0.0098 P1 cortex AAATAAAGTC GAAATAAATG (4) GCTCTGTATC TATGAAAATG (2) TTTCTAAAAA (2) 27.1 0.0271 Hypothalamus AAATAAAGTC AAGAGAATGC GAAATAAATG (4) GCGGCGGCGG (3) TATGAAAATG (2) TCAGAACTTT 59.7 0.0597 E12.5 retina AAATAAAGTC AAGAGAATGC AAGCTCTGCT ATCACACAGG GAAATAAATG (4) GCGGCGGCGG (3) TATGAAAATG (2) TTCAGGGCAG TTTCTAAAAA (2) 69.5 0.0695 E14.5 retina AAATAAAGTC AAGAGAATGC ATCACACAGG CAAGAGCACA (3) GAAATAAATG (4) GCGGCGGCGG (3) TATGAAAATG (2) TTTCTAAAAA (2) 92.9 0.0929 E16.5 retina AAATAAAGTC ATCACACAGG CAAGAGCACA (3) GAAATAAATG (4) GCGGCGGCGG (3) TATGAAAATG (2) 106.8 0.1068 E18.5 retina AAATAAAGTC AAGAGAATGC CAAGAGCCCA GAAATAAATG (4) GCGGCGGCGG (3) TATGAAAATG (2) TTTCTAAAAA (2) 103.6 0.1036 P0.5 retina AAATAAAGTC AAGAAGATAG AAGAGAATGC ATCACACAGG GAAATAAATG (4) GCGGCGGCGG (3) GCTCTGTATC TATGAAAATG (2) 53.1 0.0531 P2.5 retina AAATAAAGTC CAAGAGCCCA GAAATAAATG (4) GAATAAACTC GCGGCGGCGG (3) TATGAAAATG (2) TCAGAACTTT TTTCTAAAAA (2) 77.5 0.0775 P4.5 retina AAATAAAGTC AAATAAAGTG ATCACACAGG CAAGAGCACA (3) GAAATAAATG (4) GAATAAACTC GCGGCGGCGG (3) TATGAAAATG (2) TGACATTTTA (3) TTTCTAAAAA (2) 91.3 0.0913 P6.5 retina AAATAAAGTC ATCACACAGG CAAGAGCCCA GAAATAAATG (4) GCGGCGGCGG (3) GCTCTGTATC TATGAAAACG TATGAAAATG (2) TTTCTAAAAA (2) 96.8 0.0968 P10.5 crx- retina AAATAAAGTC CAAGAGCCCA GAAATAAATG (4) GCGGCGGCGG (3) GCTCTGTATC TATGAAAATG (2) 76.2 0.0762 P10.5 crx+ retina AAATAAAGTC ATCACACAGG CAAGAGCCCA GAAATAAATG (4) GCGGCGGCGG (3) GCTCTGTATC TATGAAAATG (2) TGACATTTTA (3) 65.3 0.0653 Adult retinal AAATAAAGTC GAAATAAATG (4) GCGGCGGCGG (3) GCTCTGTATC TATGAAAATG (2) TTTCTAAAAA (2) 44.6 0.0446 ONL AAGCTCTGCT ATCACACAGG GAAATAAATG (4) GCGGCGGCGG (3) TATGAAAATG (2) 44.1 0.0441