Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.196598
G430041M01Rik
RIKEN cDNA G430041M01 gene
6
101214
Gene Ontology
mRNA processing
|
nuclear mRNA splicing, via spliceosome
|
nucleus
|
RNA binding
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAGGGGAGG
(
4
)
CTTCCTAGTC
TGGGGAAGAG
61.9
0.0619
Cb medulloblastoma
AAAGGGGAGG
(
4
)
CTTCCTAGTC
GAGCAGTTGA
TGGGGAAGAG
32.3
0.0323
P8 GC+1d culture
AAAGGGGAGG
(
4
)
CTTCCTAGTC
TGGGGAAGAG
33.1
0.0331
P8 GC+SHH+1d culture
CTTCCTAGTC
TGGGGAAGAG
52.7
0.0527
3T3 fibroblasts
GAGCAGTTGA
TGGGGAAGAG
10.5
0.0105
E15 cortex
AAAGGGGAGG
(
4
)
TGGGGAAGAG
14.8
0.0148
P1 cortex
AGTGATGTAG
(
3
)
TGGGGAAGAG
22.7
0.0227
Hypothalamus
CTTCCTAGTC
TGGGGAAGAG
30.8
0.0308
E12.5 retina
AAAGGGGAGG
(
4
)
CTTCCTAGTC
TGGGGAAGAG
118.3
0.1183
E14.5 retina
CTTCCTAGTC
GAGCAGTTGA
TGGGGAAGAG
49.1
0.0491
E16.5 retina
CTTCCTAGTC
TGGGGAAGAG
54.3
0.0543
E18.5 retina
TGGGGAAGAG
129.1
0.1291
P0.5 retina
AAAGGGGAGG
(
4
)
TGGGGAAGAG
27.5
0.0275
P2.5 retina
AAAGGGGAGG
(
4
)
TGGGGAAGAG
56.3
0.0563
P4.5 retina
AGTGATGTAG
(
3
)
TGGGGAAGAG
109
0.109
P6.5 retina
AAAGGGGAGG
(
4
)
TGGGGAAGAG
66.7
0.0667
P10.5 crx- retina
CTTCCTAGTC
TGGGGAAGAG
35.3
0.0353
P10.5 crx+ retina
CTTCCTAGTC
GAGCAGTTGA
TGGGGAAGAG
67.2
0.0672
Adult retinal
AAAGGGGAGG
(
4
)
AGTGATGTAG
(
3
)
TGGGGAAGAG
29.7
0.0297
ONL
AAAGGGGAGG
(
4
)
TGGGGAAGAG
47.9
0.0479
