Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.19804	Spg4	spastic paraplegia 4 homolog (human)	17		50850
Gene Ontology	ATP binding | ATPase activity | nucleotide binding | nucleus
Human Homolog	SPG4[spastic paraplegia 4 (autosomal dominant; spastin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATGTGGCAT TCTGAGAAAA (2) 4.9 0.0049 Cb medulloblastoma TATGTGGCAT 2.3 0.0023 P8 GC+1d culture GTTTCTGGAG TAATTTCAAA TATGTGGCAT TCTGAGAAAA (2) 11.3 0.0113 P8 GC+SHH+1d culture ACAGAGTCCT GTTTCTGGAG TATGTGGCAT TGAGGCCTTT 7 0.007 P1 cortex TATGTGGCAT TCTGAGAAAA (2) 9 0.009 Hypothalamus TATGTGGCAT 1.8 0.0018 E12.5 retina TATGTGGCAT 3.8 0.0038 E14.5 retina ACAGAGTCCT TCTGAGAAAA (2) TGAGGCCTTT 5.4 0.0054 E16.5 retina ACAGAGTCCT 1.8 0.0018 E18.5 retina TATGTGGCAT 5.5 0.0055 P0.5 retina GTTTCTGGAG TATGTGGCAT 5.9 0.0059 P2.5 retina TATGTGGCAT TGAGGCCTTT 3.6 0.0036 P4.5 retina TGAGGCCTTT 2 0.002 P6.5 retina TAATTTCAAA TCTGAGAAAA (2) 5 0.005 P10.5 crx- retina ACAGAGTCCT 7.4 0.0074 Adult retinal TATGTGGCAT 3.7 0.0037 ONL ACAGAGTCCT TATGTGGCAT 3.8 0.0038