Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.200608	Clu	clusterin	14	14 D1 (14 28.0 cM)	12759
Gene Ontology	cell death | extracellular space
Human Homolog	CLU[clusterin (complement lysis inhibitor, SP-40,40, sulfated glycoprotein 2, testosterone-repressed prostate message 2, apolipoprotein J)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCCAGCCTT (2) 53.8 0.0538 P8 Cb GC TCTCCAGGTG (3) 9.8 0.0098 P8 Cb GC TCTCCAGGCG 1.6 0.0016 Cb medulloblastoma TTCCAGCCTT (2) 159.6 0.1596 Cb medulloblastoma TCTCCAGGCG 30.1 0.0301 Cb medulloblastoma TCTCCAGGTG (3) 6.9 0.0069 Cb medulloblastoma TGGAGTTCTC 2.3 0.0023 P8 GC+1d culture TTCCAGCCTT (2) 83.3 0.0833 P8 GC+1d culture TCTCCAGGCG 20.5 0.0205 P8 GC+1d culture TCTCCAGGTG (3) 17.1 0.0171 P8 GC+1d culture TGGAGTTCTC 1.1 0.0011 P8 GC+SHH+1d culture TTCCAGCCTT (2) 65.6 0.0656 P8 GC+SHH+1d culture TCTCCAGGCG 9.4 0.0094 P8 GC+SHH+1d culture TCTCCAGGTG (3) 7 0.007 P8 GC+SHH+1d culture TTCCAGCCCT 1.2 0.0012 3T3 fibroblasts TTCCAGCCTT (2) 7 0.007 E15 cortex TTCCAGCCTT (2) 34.6 0.0346 E15 cortex CGGACAGCTT 4.9 0.0049 E15 cortex TCTCCAGGCG 4.9 0.0049 P1 cortex TTCCAGCCTT (2) 40.9 0.0409 Hypothalamus TTCCAGCCTT (2) 125 0.125 Hypothalamus TCTCCAGGCG 58 0.058 Hypothalamus TGGAGTTCTC 5.4 0.0054 Hypothalamus CGGACAGCTT 1.8 0.0018 E12.5 retina TTCCAGCCTT (2) 22.5 0.0225 E14.5 retina TTCCAGCCTT (2) 47.4 0.0474 E16.5 retina TTCCAGCCTT (2) 45.3 0.0453 E18.5 retina TTCCAGCCTT (2) 41.8 0.0418 P0.5 retina TTCCAGCCTT (2) 19.6 0.0196 P0.5 retina TCTCCAGGCG 2 0.002 P2.5 retina TTCCAGCCTT (2) 58.1 0.0581 P2.5 retina TCTCCAGGCG 1.8 0.0018 P4.5 retina TTCCAGCCTT (2) 53.5 0.0535 P4.5 retina TTCCAGCCCT 4 0.004 P4.5 retina TCTCCAGGTG (3) 2 0.002 P6.5 retina TTCCAGCCTT (2) 53.4 0.0534 P6.5 retina CGGACAGCTT 1.7 0.0017 P6.5 retina TCTCCAGGCG 1.7 0.0017 P10.5 crx- retina TTCCAGCCTT (2) 94.7 0.0947 P10.5 crx- retina TCTCCAGGCG 29.7 0.0297 P10.5 crx+ retina TTCCAGCCTT (2) 80.7 0.0807 P10.5 crx+ retina TCTCCAGGCG 13.5 0.0135 Adult retinal TTCCAGCCTT (2) 50 0.05 Adult retinal TCTCCAGGCG 44.4 0.0444 Adult retinal TGGAGTTCTC 1.9 0.0019 ONL TCTCCAGGCG 7.7 0.0077 ONL TTCCAGCCTT (2) 5.7 0.0057 ONL TCTCCAGGTG (3) 1.9 0.0019