Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.200608	Clu	clusterin	14	14 D1 (14 28.0 cM)	12759
Gene Ontology	cell death | extracellular space
Human Homolog	CLU[clusterin (complement lysis inhibitor, SP-40,40, sulfated glycoprotein 2, testosterone-repressed prostate message 2, apolipoprotein J)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 129 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATTGGTTCA (2) GAAAAAAGAA GCATCCTGTA TCTCCAAGGC TCTCCAGGCG TCTCCAGGTG (3) TTCCAGCCTT (2) TTTCAGCCCT 83.1 0.0831 Cb medulloblastoma TCTCCAAGGC TCTCCAGGCG TCTCCAGGTG (3) TGGAGTTCTC TTCCAGCCTT (2) TTCCCTCCCC (2) TTTCAGCCCT 205.8 0.2058 P8 GC+1d culture AATTGGTTCA (2) GAAGTCAGAA TCTCCAAGGC TCTCCAGGCG TCTCCAGGTG (3) TGGAGTTCTC TTCCAGCCTT (2) 127.6 0.1276 P8 GC+SHH+1d culture AATTGGTTCA (2) GAAGTCAGAA GAATGTCCAG TCTCCAAGGC TCTCCAGGCG TCTCCAGGTG (3) TTCCAGCCCT TTCCAGCCTT (2) TTTCAGCCCT 107.8 0.1078 3T3 fibroblasts GAAGTCAGAA TTCCAGCCTT (2) 21 0.021 E15 cortex CGGACAGCTT TCTCCAGGCG TTCCAGCCTT (2) TTCCCTCCCC (2) 49.3 0.0493 P1 cortex GAATGTCCAG TCTCCAAGGC TTCCAGCCTT (2) 49.9 0.0499 Hypothalamus CGGACAGCTT GAATGTCCAG TCTCCAAGGC TCTCCAGGCG TCTTCCTCCC TGGAGTTCTC TTCCAGCCTT (2) TTCCCGCCTT 197.4 0.1974 E12.5 retina AATTGGTTCA (2) GAATGTCCAG TCTCCAAGGC TTCCAGCCTT (2) TTTCAGCCCT 41.4 0.0414 E14.5 retina AATTGGTTCA (2) CTGTGAGCAG GAAAAAAGAA GAAGTCAGAA GAATGTCCAG TTCCAGCCTT (2) TTCCCGCCTT TTTCAGCCCT 76.4 0.0764 E16.5 retina AATTGGTTCA (2) GAATGTCCAG TCTCCAAGGC TGAAAAGTGC TTCCAGCCTT (2) TTCCCTCCCC (2) 67 0.067 E18.5 retina AATTGGTTCA (2) GCATCCTGTA TCTCCAAGGC TCTTCCTCCC TTCCAGCCTT (2) TTTCAGCCCT 63.5 0.0635 P0.5 retina AATTGGTTCA (2) CATCTAGAGG GAATGTCCAG TCTCCAAGGC TCTCCAGGCG TTCCAGCCTT (2) TTTCAGCCCT 58.9 0.0589 P2.5 retina AATTGGTTCA (2) CATCTAGAGG CTGTGAGCAG GAATGTCCAG GTGCCCCCCC TCTCCAAGGC TCTCCAGGCG TGAAAAGTGC TTCCAGCCTT (2) 84.7 0.0847 P4.5 retina CATCTAGAGG GAAGTCAGAA GAATGTCCAG GCATCCTGTA GTGCCCCCCC TCTCCAAGGC TCTCCAGGTG (3) TTCCAGCCCT TTCCAGCCTT (2) 75.5 0.0755 P6.5 retina CGGACAGCTT CTGTGAGCAG GAATGTCCAG GTGCCCCCCC TCTCCAAGGC TCTCCAGGCG TTCCAGCCTT (2) TTCCCGCCTT 71.9 0.0719 P10.5 crx- retina TCTCCAAGGC TCTCCAGGCG TTCCAGCCTT (2) TTCCCTCCCC (2) 139.2 0.1392 P10.5 crx+ retina CATCTAGAGG GAAAAAAGAA GCATCCTGTA TCTCCAAGGC TCTCCAGGCG TTCCAGCCTT (2) TTCCCGCCTT 111.4 0.1114 Adult retinal CATCTAGAGG TCTCCAAGGC TCTCCAGGCG TCTTCCTCCC TGGAGTTCTC TTCCAGCCTT (2) 109.3 0.1093 ONL GAAAAAAGAA TCTCCAAGGC TCTCCAGGCG TCTCCAGGTG (3) TCTTCCTCCC TTCCAGCCTT (2) 22.9 0.0229