Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.200770	Gsk3b	glycogen synthase kinase 3 beta	16		56637
Mm.200770	BC031361	cDNA sequence BC031361			414072
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 140 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGTTTGTTCA (5) 8.2 0.0082 P8 Cb GC TGTCTTGAAT (3) 6.5 0.0065 P8 Cb GC AGGAAAAAAA (13) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC AAGTAGTTGG (2) 3.3 0.0033 P8 Cb GC GAGCATACTT (4) 3.3 0.0033 P8 Cb GC GCAGGATCCC (2) 1.6 0.0016 P8 Cb GC TAGCGCGCCC (35) 1.6 0.0016 Cb medulloblastoma AGGAAAAAAA (13) 9.2 0.0092 Cb medulloblastoma GGTTTGTTCA (5) 6.9 0.0069 Cb medulloblastoma TGACTGCTGC (3) 6.9 0.0069 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture AGGAAAAAAA (13) 10.3 0.0103 P8 GC+1d culture GGTTTGTTCA (5) 5.7 0.0057 P8 GC+1d culture TGACTGCTGC (3) 4.6 0.0046 P8 GC+1d culture CTCGGATTCA (2) 2.3 0.0023 P8 GC+1d culture GAGCATACTT (4) 2.3 0.0023 P8 GC+1d culture TAGCGCGCCC (35) 1.1 0.0011 P8 GC+1d culture TGGCGATGGC (2) 1.1 0.0011 P8 GC+1d culture TGTCTTGAAT (3) 1.1 0.0011 P8 GC+SHH+1d culture AGGAAAAAAA (13) 10.5 0.0105 P8 GC+SHH+1d culture GGTTTGTTCA (5) 10.5 0.0105 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture GAGCATACTT (4) 4.7 0.0047 P8 GC+SHH+1d culture TGTCTTGAAT (3) 3.5 0.0035 P8 GC+SHH+1d culture AAGTAGTTGG (2) 2.3 0.0023 P8 GC+SHH+1d culture TGACTGCTGC (3) 2.3 0.0023 P8 GC+SHH+1d culture CTCGGATTCA (2) 1.2 0.0012 P8 GC+SHH+1d culture GCAGGATCCC (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGAGGGATA (2) 1.2 0.0012 3T3 fibroblasts CTCGGATTCA (2) 7 0.007 3T3 fibroblasts GGTTTGTTCA (5) 3.5 0.0035 3T3 fibroblasts TAGCGCGCCC (35) 3.5 0.0035 3T3 fibroblasts TGGCGATGGC (2) 3.5 0.0035 E15 cortex GGTTTGTTCA (5) 14.8 0.0148 E15 cortex AGGAAAAAAA (13) 9.9 0.0099 E15 cortex CTCGGATTCA (2) 9.9 0.0099 E15 cortex TGACTGCTGC (3) 4.9 0.0049 E15 cortex TGTCTTGAAT (3) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex GGTTTGTTCA (5) 13.6 0.0136 P1 cortex CTCGGATTCA (2) 9.1 0.0091 P1 cortex GAAGCGAAGG (4) 9.1 0.0091 P1 cortex GAGCATACTT (4) 4.5 0.0045 P1 cortex TGACTGCTGC (3) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus AGGAAAAAAA (13) 3.6 0.0036 Hypothalamus GGTTTGTTCA (5) 3.6 0.0036 Hypothalamus TGACTGCTGC (3) 3.6 0.0036 Hypothalamus TGTCTTGAAT (3) 3.6 0.0036 Hypothalamus ACTCATTATA (2) 1.8 0.0018 Hypothalamus TGGCGATGGC (2) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina GGTTTGTTCA (5) 5.6 0.0056 E12.5 retina TGTCTTGAAT (3) 5.6 0.0056 E12.5 retina GATAAAGGAA (4) 3.8 0.0038 E12.5 retina TGACTGCTGC (3) 3.8 0.0038 E12.5 retina AAGTAGTTGG (2) 1.9 0.0019 E12.5 retina AGGAAAAAAA (13) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina AGGAAAAAAA (13) 9.1 0.0091 E14.5 retina TGTCTTGAAT (3) 3.6 0.0036 E14.5 retina CTCGGATTCA (2) 1.8 0.0018 E14.5 retina GGTTTGTTCA (5) 1.8 0.0018 E16.5 retina GGTTTGTTCA (5) 12.7 0.0127 E16.5 retina TGTCTTGAAT (3) 5.4 0.0054 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina AGGAAAAAAA (13) 3.6 0.0036 E16.5 retina CTCGGATTCA (2) 1.8 0.0018 E16.5 retina GAGCATACTT (4) 1.8 0.0018 E16.5 retina GATAAAGGAA (4) 1.8 0.0018 E18.5 retina AGGAAAAAAA (13) 16.4 0.0164 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GGTTTGTTCA (5) 9.1 0.0091 E18.5 retina TGACTGCTGC (3) 5.5 0.0055 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GGTTTGTTCA (5) 5.9 0.0059 P0.5 retina GATAAAGGAA (4) 3.9 0.0039 P0.5 retina TGACTGCTGC (3) 3.9 0.0039 P0.5 retina AAGTAGTTGG (2) 2 0.002 P0.5 retina CTCGGATTCA (2) 2 0.002 P0.5 retina GAAGCGAAGG (4) 2 0.002 P0.5 retina GAGCATACTT (4) 2 0.002 P0.5 retina TGGAGGGATA (2) 2 0.002 P0.5 retina TGTCTTGAAT (3) 2 0.002 P2.5 retina AGGAAAAAAA (13) 17.6 0.0176 P2.5 retina GGTTTGTTCA (5) 12.3 0.0123 P2.5 retina TGTCTTGAAT (3) 10.6 0.0106 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina TGACTGCTGC (3) 5.3 0.0053 P2.5 retina GATAAAGGAA (4) 3.5 0.0035 P2.5 retina CTCGGATTCA (2) 1.8 0.0018 P4.5 retina AGGAAAAAAA (13) 13.9 0.0139 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina GGTTTGTTCA (5) 7.9 0.0079 P4.5 retina TGTCTTGAAT (3) 4 0.004 P4.5 retina GATAAAGGAA (4) 2 0.002 P4.5 retina TGACTGCTGC (3) 2 0.002 P6.5 retina AGGAAAAAAA (13) 8.3 0.0083 P6.5 retina TGACTGCTGC (3) 8.3 0.0083 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina GGTTTGTTCA (5) 6.7 0.0067 P6.5 retina GATAAAGGAA (4) 5 0.005 P6.5 retina GAAGCGAAGG (4) 3.3 0.0033 P6.5 retina TGTCTTGAAT (3) 3.3 0.0033 P6.5 retina ACTCATTATA (2) 1.7 0.0017 P6.5 retina GAGCATACTT (4) 1.7 0.0017 P6.5 retina GCAGGATCCC (2) 1.7 0.0017 P10.5 crx- retina GGTTTGTTCA (5) 5.6 0.0056 P10.5 crx- retina GAGCATACTT (4) 3.7 0.0037 P10.5 crx- retina AGGAAAAAAA (13) 1.9 0.0019 P10.5 crx- retina TGACTGCTGC (3) 1.9 0.0019 P10.5 crx- retina TGGAGGGATA (2) 1.9 0.0019 P10.5 crx+ retina TGACTGCTGC (3) 15.4 0.0154 P10.5 crx+ retina AGGAAAAAAA (13) 13.5 0.0135 P10.5 crx+ retina GGTTTGTTCA (5) 9.6 0.0096 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina GAGCATACTT (4) 1.9 0.0019 P10.5 crx+ retina TGGCGATGGC (2) 1.9 0.0019 Adult retinal AGGAAAAAAA (13) 9.3 0.0093 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal GAGCATACTT (4) 3.7 0.0037 Adult retinal GGTTTGTTCA (5) 3.7 0.0037 Adult retinal TGACTGCTGC (3) 3.7 0.0037 Adult retinal AAGTAGTTGG (2) 1.9 0.0019 Adult retinal GAAGCGAAGG (4) 1.9 0.0019 Adult retinal GATAAAGGAA (4) 1.9 0.0019 Adult retinal TGGAGGGATA (2) 1.9 0.0019 Adult retinal TGGCGATGGC (2) 1.9 0.0019 Adult retinal TGTCTTGAAT (3) 1.9 0.0019 ONL AGGAAAAAAA (13) 17.2 0.0172 ONL AAGTAGTTGG (2) 5.7 0.0057 ONL GGTTTGTTCA (5) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL GAGCATACTT (4) 1.9 0.0019 ONL GCAGGATCCC (2) 1.9 0.0019 ONL TGACTGCTGC (3) 1.9 0.0019 ONL TGGCGATGGC (2) 1.9 0.0019