Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.200912 Prkab1protein kinase, AMP-activated, beta 1 non-catalytic subunit 5  5  19079 
 Gene Ontology fatty acid biosynthesis | nucleus | response to stress | SNF1A/AMP-activated protein kinase activity
 Human Homolog PRKAB1[protein kinase, AMP-activated, beta 1 non-catalytic subunit]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCACATCATAGA (3)70.10.0701
P8 Cb GCGTGACATCAC (5)4.90.0049
P8 Cb GCTCAGCAGAGG (3)3.30.0033
P8 Cb GCCTGAACACCT (3)1.60.0016
P8 Cb GCTGCTCCTCAG (4)1.60.0016
P8 Cb GCTGTCCTCATT (7)1.60.0016
Cb medulloblastomaACATCATAGA (3)20.80.0208
Cb medulloblastomaGTGACATCAC (5)2.30.0023
Cb medulloblastomaTGCTCCTCAG (4)2.30.0023
P8 GC+1d cultureACATCATAGA (3)41.10.0411
P8 GC+1d cultureTCAGCAGAGG (3)3.40.0034
P8 GC+1d cultureCTGAACACCT (3)1.10.0011
P8 GC+1d cultureGACAGCCCTG (4)1.10.0011
P8 GC+1d cultureGGAGAAAAAG (6)1.10.0011
P8 GC+1d cultureTGTCCTCATT (7)1.10.0011
P8 GC+SHH+1d cultureACATCATAGA (3)52.70.0527
P8 GC+SHH+1d cultureGTGACATCAC (5)3.50.0035
P8 GC+SHH+1d cultureTCAGCAGAGG (3)3.50.0035
P8 GC+SHH+1d cultureTGCTCCTCAG (4)2.30.0023
P8 GC+SHH+1d cultureTGTCCTCATT (7)1.20.0012
3T3 fibroblastsACATCATAGA (3)140.014
3T3 fibroblastsCACTTGTGTG (4)3.50.0035
3T3 fibroblastsCTGAACACCT (3)3.50.0035
3T3 fibroblastsGAAACCAGAT (5)3.50.0035
3T3 fibroblastsTCAGCAGAGG (3)3.50.0035
3T3 fibroblastsTGCTCCTCAG (4)3.50.0035
E15 cortexACATCATAGA (3)14.80.0148
E15 cortexGAAACCAGAT (5)4.90.0049
E15 cortexGACAGCCCTG (4)4.90.0049
E15 cortexGGAGAAAAAG (6)4.90.0049
P1 cortexACATCATAGA (3)59.10.0591
P1 cortexGACAGCCCTG (4)9.10.0091
P1 cortexGTGACATCAC (5)4.50.0045
HypothalamusACATCATAGA (3)52.50.0525
HypothalamusTCAGCAGAGG (3)7.20.0072
HypothalamusTGCTCCTCAG (4)5.40.0054
HypothalamusGACAGCCCTG (4)1.80.0018
HypothalamusTGAAAGATCA (3)1.80.0018
HypothalamusTGTCCTCATT (7)1.80.0018
E12.5 retinaACATCATAGA (3)178.30.1783
E12.5 retinaTCAGCAGAGG (3)7.50.0075
E12.5 retinaGACAGCCCTG (4)1.90.0019
E12.5 retinaGTGACATCAC (5)1.90.0019
E14.5 retinaACATCATAGA (3)109.30.1093
E14.5 retinaTCAGCAGAGG (3)3.60.0036
E14.5 retinaGTGACATCAC (5)1.80.0018
E14.5 retinaTGCTCCTCAG (4)1.80.0018
E14.5 retinaTGTCCTCATT (7)1.80.0018
E16.5 retinaACATCATAGA (3)103.20.1032
E16.5 retinaTCAGCAGAGG (3)5.40.0054
E16.5 retinaTGCTCCTCAG (4)3.60.0036
E16.5 retinaGTGACATCAC (5)1.80.0018
E16.5 retinaTGTCCTCATT (7)1.80.0018
E18.5 retinaACATCATAGA (3)72.80.0728
E18.5 retinaTCAGCAGAGG (3)5.50.0055
E18.5 retinaGGAGAAAAAG (6)1.80.0018
E18.5 retinaGTGACATCAC (5)1.80.0018
P0.5 retinaACATCATAGA (3)550.055
P0.5 retinaCTGAACACCT (3)3.90.0039
P0.5 retinaTCAGCAGAGG (3)3.90.0039
P0.5 retinaTGTCCTCATT (7)3.90.0039
P0.5 retinaGTGACATCAC (5)20.002
P2.5 retinaACATCATAGA (3)440.044
P2.5 retinaGTGACATCAC (5)10.60.0106
P2.5 retinaTCAGCAGAGG (3)3.50.0035
P2.5 retinaTGTCCTCATT (7)1.80.0018
P4.5 retinaACATCATAGA (3)59.40.0594
P4.5 retinaGTGACATCAC (5)40.004
P4.5 retinaTGTCCTCATT (7)40.004
P4.5 retinaTCAGCAGAGG (3)20.002
P6.5 retinaACATCATAGA (3)31.70.0317
P6.5 retinaGTGACATCAC (5)11.70.0117
P6.5 retinaTCAGCAGAGG (3)6.70.0067
P6.5 retinaTGTCCTCATT (7)3.30.0033
P6.5 retinaGAAACCAGAT (5)1.70.0017
P6.5 retinaGACAGCCCTG (4)1.70.0017
P10.5 crx- retinaACATCATAGA (3)72.50.0725
P10.5 crx- retinaTCAGCAGAGG (3)37.20.0372
P10.5 crx- retinaTGTCCTCATT (7)3.70.0037
P10.5 crx- retinaGACAGACCTG (3)1.90.0019
P10.5 crx- retinaGACAGCCCTG (4)1.90.0019
P10.5 crx+ retinaACATCATAGA (3)42.30.0423
P10.5 crx+ retinaTCAGCAGAGG (3)34.60.0346
P10.5 crx+ retinaGACAGACCTG (3)3.80.0038
P10.5 crx+ retinaGACAGCCCTG (4)1.90.0019
P10.5 crx+ retinaTGAAAGATCA (3)1.90.0019
P10.5 crx+ retinaTGTCCTCATT (7)1.90.0019
Adult retinalGTGACATCAC (5)14.80.0148
Adult retinalACATCATAGA (3)9.30.0093
Adult retinalCACTTGTGTG (4)9.30.0093
Adult retinalTCAGCAGAGG (3)3.70.0037
Adult retinalGAAACCAGAT (5)1.90.0019
Adult retinalGACAGACCTG (3)1.90.0019
Adult retinalGACAGCCCTG (4)1.90.0019
Adult retinalTGTCCTCATT (7)1.90.0019
ONLACATCATAGA (3)15.30.0153
ONLGTGACATCAC (5)13.40.0134
ONLTGAAAGATCA (3)3.80.0038
ONLGACAGACCTG (3)1.90.0019
ONLTCAGCAGAGG (3)1.90.0019
ONLTGTCCTCATT (7)1.90.0019