Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.200912	Prkab1	protein kinase, AMP-activated, beta 1 non-catalytic subunit	5	5	19079
Gene Ontology	fatty acid biosynthesis | nucleus | response to stress | SNF1A/AMP-activated protein kinase activity
Human Homolog	PRKAB1[protein kinase, AMP-activated, beta 1 non-catalytic subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGACATCAC 4.9 0.0049 P8 Cb GC TCAGCAGAGG (2) 3.3 0.0033 Cb medulloblastoma GTGACATCAC 2.3 0.0023 P8 GC+1d culture TCAGCAGAGG (2) 3.4 0.0034 P8 GC+1d culture GACAGCCCTG 1.1 0.0011 P8 GC+SHH+1d culture GTGACATCAC 3.5 0.0035 P8 GC+SHH+1d culture TCAGCAGAGG (2) 3.5 0.0035 3T3 fibroblasts TCAGCAGAGG (2) 3.5 0.0035 E15 cortex GACAGCCCTG 4.9 0.0049 P1 cortex GACAGCCCTG 9.1 0.0091 P1 cortex GTGACATCAC 4.5 0.0045 Hypothalamus TCAGCAGAGG (2) 7.2 0.0072 Hypothalamus GACAGCCCTG 1.8 0.0018 E12.5 retina TCAGCAGAGG (2) 7.5 0.0075 E12.5 retina GACAGCCCTG 1.9 0.0019 E12.5 retina GTGACATCAC 1.9 0.0019 E14.5 retina TCAGCAGAGG (2) 3.6 0.0036 E14.5 retina GTGACATCAC 1.8 0.0018 E16.5 retina TCAGCAGAGG (2) 5.4 0.0054 E16.5 retina GTGACATCAC 1.8 0.0018 E18.5 retina TCAGCAGAGG (2) 5.5 0.0055 E18.5 retina GTGACATCAC 1.8 0.0018 P0.5 retina TCAGCAGAGG (2) 3.9 0.0039 P0.5 retina GTGACATCAC 2 0.002 P2.5 retina GTGACATCAC 10.6 0.0106 P2.5 retina TCAGCAGAGG (2) 3.5 0.0035 P4.5 retina GTGACATCAC 4 0.004 P4.5 retina TCAGCAGAGG (2) 2 0.002 P6.5 retina GTGACATCAC 11.7 0.0117 P6.5 retina TCAGCAGAGG (2) 6.7 0.0067 P6.5 retina GACAGCCCTG 1.7 0.0017 P10.5 crx- retina TCAGCAGAGG (2) 37.2 0.0372 P10.5 crx- retina GACAGCCCTG 1.9 0.0019 P10.5 crx+ retina TCAGCAGAGG (2) 34.6 0.0346 P10.5 crx+ retina GACAGCCCTG 1.9 0.0019 Adult retinal GTGACATCAC 14.8 0.0148 Adult retinal TCAGCAGAGG (2) 3.7 0.0037 Adult retinal GACAGCCCTG 1.9 0.0019 ONL GTGACATCAC 13.4 0.0134 ONL TCAGCAGAGG (2) 1.9 0.0019