Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.202725	Ddx46	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	13		212880
Gene Ontology	ATP binding | helicase activity | hydrolase activity
Human Homolog	DDX46[DEAD (Asp-Glu-Ala-Asp) box polypeptide 46]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAGCAGGAC (3) 9.8 0.0098 P8 Cb GC CACACACAGG (7) 1.6 0.0016 P8 Cb GC GAGAATGACC (7) 1.6 0.0016 P8 Cb GC GGCCGGGAGT (3) 1.6 0.0016 Cb medulloblastoma CACACACAGG (7) 2.3 0.0023 Cb medulloblastoma TGAGCAGGAC (3) 2.3 0.0023 P8 GC+1d culture TGAGCAGGAC (3) 11.4 0.0114 P8 GC+SHH+1d culture TGAGCAGGAC (3) 12.9 0.0129 P8 GC+SHH+1d culture GAGAATGACC (7) 2.3 0.0023 P8 GC+SHH+1d culture CACACACAGG (7) 1.2 0.0012 P8 GC+SHH+1d culture TGGGTGTTGA (8) 1.2 0.0012 3T3 fibroblasts GGCCGGGAGT (3) 7 0.007 3T3 fibroblasts TGAGCAGGAC (3) 3.5 0.0035 E15 cortex TGAGCAGGAC (3) 14.8 0.0148 E15 cortex GAGAATGACC (7) 9.9 0.0099 P1 cortex GCAGCTTACA (10) 4.5 0.0045 P1 cortex TGAGCAGGAC (3) 4.5 0.0045 Hypothalamus TGAGCAGGAC (3) 9.1 0.0091 Hypothalamus GAGAATGACC (7) 3.6 0.0036 Hypothalamus GTGCAGGAAG 1.8 0.0018 E12.5 retina TGAGCAGGAC (3) 11.3 0.0113 E12.5 retina GAGAATGACC (7) 1.9 0.0019 E12.5 retina GCAGCTTACA (10) 1.9 0.0019 E14.5 retina TGAGCAGGAC (3) 7.3 0.0073 E14.5 retina GCAGCTTACA (10) 3.6 0.0036 E14.5 retina CACACACAGG (7) 1.8 0.0018 E14.5 retina GTGCAGGAAG 1.8 0.0018 E16.5 retina TGAGCAGGAC (3) 7.2 0.0072 E16.5 retina CACACACAGG (7) 1.8 0.0018 E16.5 retina GTGCAGGAAG 1.8 0.0018 E16.5 retina TGGGTGTTGA (8) 1.8 0.0018 E18.5 retina TGAGCAGGAC (3) 3.6 0.0036 E18.5 retina CACACACAGG (7) 1.8 0.0018 E18.5 retina GAGAATGACC (7) 1.8 0.0018 E18.5 retina GCAGCTTACA (10) 1.8 0.0018 E18.5 retina TGGGTGTTGA (8) 1.8 0.0018 P0.5 retina TGAGCAGGAC (3) 11.8 0.0118 P0.5 retina GCAGCTTACA (10) 7.9 0.0079 P2.5 retina TGAGCAGGAC (3) 15.8 0.0158 P4.5 retina TGAGCAGGAC (3) 4 0.004 P4.5 retina GCAGCTTACA (10) 2 0.002 P6.5 retina TGAGCAGGAC (3) 11.7 0.0117 P6.5 retina GCAGCTTACA (10) 1.7 0.0017 P10.5 crx- retina TGAGCAGGAC (3) 9.3 0.0093 P10.5 crx- retina GCAGCTTACA (10) 1.9 0.0019 P10.5 crx+ retina GCAGCTTACA (10) 5.8 0.0058 P10.5 crx+ retina TGAGCAGGAC (3) 5.8 0.0058 P10.5 crx+ retina GTGCAGGAAG 1.9 0.0019 Adult retinal TGAGCAGGAC (3) 7.4 0.0074 Adult retinal GAGAATGACC (7) 1.9 0.0019 ONL TGAGCAGGAC (3) 7.7 0.0077 ONL GCAGCTTACA (10) 1.9 0.0019