Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.203965
D10Ertd516e
DNA segment, Chr 10, ERATO Doi 516, expressed
10
10 63.0 cM
71902
Human Homolog
TIP120A[TBP-interacting protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TACAGATTCT
(
2
)
TGACCGCACA
(
2
)
TTTCTTTCCT
8.1
0.0081
Cb medulloblastoma
TACAGATTCT
(
2
)
TGACCGCACA
(
2
)
6.9
0.0069
P8 GC+1d culture
TACAGATTCT
(
2
)
TGACCGCACA
(
2
)
TGACCGCCCC
TTTCTTTCCT
9
0.009
P8 GC+SHH+1d culture
GATTTCTTGG
TACAGATTCT
(
2
)
TGACCGCACA
(
2
)
TGACCGCCCC
10.6
0.0106
3T3 fibroblasts
TGACCGCACA
(
2
)
TGACCGCCCC
14
0.014
Hypothalamus
GATTTCTTGG
TGACCGCACA
(
2
)
5.4
0.0054
E12.5 retina
GATTTCTTGG
TGACCGCACA
(
2
)
TTTCTTTCCT
7.6
0.0076
E14.5 retina
GATTTCTTGG
TTTCTTTCCT
3.6
0.0036
E18.5 retina
GATTTCTTGG
TACAGATTCT
(
2
)
3.6
0.0036
P0.5 retina
GATTTCTTGG
TGACCGCACA
(
2
)
5.9
0.0059
P2.5 retina
GATTTCTTGG
TTTCTTTCCT
5.3
0.0053
P6.5 retina
GATTTCTTGG
3.3
0.0033
P10.5 crx- retina
GATTTCTTGG
TGACCGCACA
(
2
)
11.2
0.0112
P10.5 crx+ retina
TACAGATTCT
(
2
)
TGACCGCACA
(
2
)
3.8
0.0038
Adult retinal
TGACCGCACA
(
2
)
1.9
0.0019
ONL
GATTTCTTGG
GTTTGGCTTT
TGACCGCACA
(
2
)
7.6
0.0076
