Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20615	Pex11a	peroxisomal biogenesis factor 11a	7		18631
Gene Ontology	integral to membrane | peroxisome organization and biogenesis
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCATCCAGGC (2) CTCGAGTTTC (3) GACATTTTAC (2) GTGTTTGTGT TTTTTTTTTT (2) 22.8 0.0228 Cb medulloblastoma AATCCTTTAA ACCCGCCTGC CTCGAGTTTC (3) TCTGACTGAG TTTTTTTTTT (2) 23.1 0.0231 P8 GC+1d culture AAGAGTCCTT CTCGAGTTTC (3) GACATTTTAC (2) GTAAGTGGCA GTGGCAGGCA (2) GTGTTTGTGT TTTTTTTTTT (2) 43.2 0.0432 P8 GC+SHH+1d culture AATCCTTTAA AGGTGAGCGA CTCGAGTTTC (3) GACATTTTAC (2) GTAAGTGGCA GTGGCAGGCA (2) TTTTTTTTTT (2) 21.1 0.0211 3T3 fibroblasts ACCCGCCTGC CTCGAGTTTC (3) 49 0.049 E15 cortex CCATCCAGGC (2) CTCGAGTTTC (3) GAAATGGAAA GTGTTTGTGT TTTTTTTTTT (2) 34.4 0.0344 P1 cortex AAGAGTCCTT AATCCTTTAA ACCCGCCTGC CCATCCAGGC (2) TTTTTTTTTT (2) 31.7 0.0317 Hypothalamus CCATCCAGGC (2) CTCGAGTTTC (3) TTTTTTTTTT (2) 12.6 0.0126 E12.5 retina AATCCTTTAA CTCGAGTTTC (3) GACATTTTAC (2) GTAAGTGGCA GTGTTTGTGT TCTGACTGAG TTTTTTTTTT (2) 26.4 0.0264 E14.5 retina AATCCTTTAA CTCGAGTTTC (3) GACATTTTAC (2) TTTTTTTTTT (2) 30.9 0.0309 E16.5 retina AATGAAATTG (2) GACATTTTAC (2) GTGGCAGGCA (2) GTGTTTGTGT TCTGACTGAG TTTTTTTTTT (2) 18 0.018 E18.5 retina ACCCGCCTGC CTCGAGTTTC (3) GTAAGTGGCA TTTTTTTTTT (2) 25.4 0.0254 P0.5 retina AATGAAATTG (2) ACCCGCCTGC CTCGAGTTTC (3) GTGTTTGTGT TCTGACTGAG TTTTTTTTTT (2) 39.3 0.0393 P2.5 retina CTCGAGTTTC (3) GACATTTTAC (2) GTGTTTGTGT TCTGACTGAG TTTTTTTTTT (2) 28.2 0.0282 P4.5 retina AATCCTTTAA ACCCGCCTGC CCATCCAGGC (2) CTCGAGTTTC (3) GTAAGTGGCA GTGTTTGTGT TTTTTTTTTT (2) 29.8 0.0298 P6.5 retina AATCCTTTAA CTCGAGTTTC (3) GAAATGGAAA GTAAGTGGCA TTTTTTTTTT (2) 28.3 0.0283 P10.5 crx- retina AATGAAATTG (2) ACCCGCCTGC AGGTGAGCGA CTCGAGTTTC (3) GAAATGGAAA 18.7 0.0187 P10.5 crx+ retina AAGAGTCCTT AATCCTTTAA ACCCGCCTGC AGGTGAGCGA CTCGAGTTTC (3) TTTTTTTTTT (2) 22.9 0.0229 Adult retinal ACCCGCCTGC CTCGAGTTTC (3) GACATTTTAC (2) GTGTTTGTGT TTTTTTTTTT (2) 24.1 0.0241 ONL AATCCTTTAA CCATCCAGGC (2) CTCGAGTTTC (3) GTGTTTGTGT TTTTTTTTTT (2) 22.9 0.0229