Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.206536	Sdc3	syndecan 3	4	4 60.8 cM	20970
Gene Ontology	cytoskeletal protein binding | integral to membrane | membrane
Human Homolog	SDC3[syndecan 3 (N-syndecan)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAAGAAGG (2) GGCGCTCGTA 19.5 0.0195 Cb medulloblastoma AAGAAGAAGG (2) GGCGCTCGTA 18.5 0.0185 P8 GC+1d culture AAGAAGAAGG (2) GGCGCTCGTA 25.1 0.0251 P8 GC+SHH+1d culture AAGAAGAAGG (2) GCCAAAACTT GGCGCTCGTA 22.3 0.0223 3T3 fibroblasts GGCGCTCGTA 7 0.007 E15 cortex GGCGCTCGTA 14.8 0.0148 P1 cortex GGCGCTCGTA 18.2 0.0182 Hypothalamus GGCGCTCGTA GTAAGGATGG (2) 18.1 0.0181 E12.5 retina GGCGCTCGTA 5.6 0.0056 E14.5 retina GGCGCTCGTA GTAAGGATGG (2) 3.6 0.0036 E16.5 retina GGCGCTCGTA GTAAGGATGG (2) 19.9 0.0199 E18.5 retina GGCGCTCGTA 7.3 0.0073 P0.5 retina GGCGCTCGTA 9.8 0.0098 P2.5 retina AAGAAGAAGG (2) GGCGCTCGTA 10.6 0.0106 P4.5 retina GGCGCTCGTA 4 0.004 P6.5 retina GGCGCTCGTA 8.3 0.0083 P10.5 crx- retina GCCAAAACTT GGCGCTCGTA GTAAGGATGG (2) 11.2 0.0112 P10.5 crx+ retina GGCGCTCGTA 23.1 0.0231 Adult retinal GCCAAAACTT GGCGCTCGTA 14.9 0.0149 ONL AAGAAGAAGG (2) GGCGCTCGTA 5.7 0.0057