Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.207678
Ube2r2
ubiquitin-conjugating enzyme E2R 2
4
67615
Mm.207678
2310029O18Rik
RIKEN cDNA 2310029O18 gene
4
76946
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 101 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGGCTGCAG
(
3
)
22.8
0.0228
P8 Cb GC
TTAATATTTA (
3
)
9.8
0.0098
P8 Cb GC
TTTCCTTCCA (
5
)
3.3
0.0033
P8 Cb GC
GTTCCCTTTC
(
2
)
1.6
0.0016
P8 Cb GC
TTTATGTTTT (
6
)
1.6
0.0016
Cb medulloblastoma
GAGGCTGCAG
(
3
)
20.8
0.0208
Cb medulloblastoma
TTAATATTTA (
3
)
13.9
0.0139
P8 GC+1d culture
GAGGCTGCAG
(
3
)
33.1
0.0331
P8 GC+1d culture
TTAATATTTA (
3
)
25.1
0.0251
P8 GC+1d culture
TTCCTTCAGT
(
4
)
4.6
0.0046
P8 GC+1d culture
TTGGGATGGT
(
2
)
1.1
0.0011
P8 GC+1d culture
TTTATGTTTT (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GAGGCTGCAG
(
3
)
22.2
0.0222
P8 GC+SHH+1d culture
TTAATATTTA (
3
)
10.5
0.0105
P8 GC+SHH+1d culture
TTCCTTCAGT
(
4
)
5.9
0.0059
P8 GC+SHH+1d culture
TTTATGTTTT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GTTCCCTTTC
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTATGAAGTG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTGGGATGGT
(
2
)
1.2
0.0012
3T3 fibroblasts
GAGGCTGCAG
(
3
)
14
0.014
3T3 fibroblasts
TTCCTTCAGT
(
4
)
10.5
0.0105
3T3 fibroblasts
TTGGGATGGT
(
2
)
7
0.007
3T3 fibroblasts
AGGGCATAAA (
3
)
3.5
0.0035
3T3 fibroblasts
GGGCTGGAGA (
8
)
3.5
0.0035
E15 cortex
GAGGCTGCAG
(
3
)
19.8
0.0198
P1 cortex
TTAATATTTA (
3
)
13.6
0.0136
P1 cortex
GAGGCTGCAG
(
3
)
9.1
0.0091
P1 cortex
TTGGGATGGT
(
2
)
9.1
0.0091
P1 cortex
AGAATGGAGA (
9
)
4.5
0.0045
P1 cortex
TTCCTTCAGT
(
4
)
4.5
0.0045
Hypothalamus
TTAATATTTA (
3
)
39.8
0.0398
Hypothalamus
GAGGCTGCAG
(
3
)
14.5
0.0145
Hypothalamus
GGAATTGGAG (
3
)
5.4
0.0054
Hypothalamus
TTCCTTCAGT
(
4
)
3.6
0.0036
Hypothalamus
TTGGGATGGT
(
2
)
3.6
0.0036
Hypothalamus
AGAATGGAGA (
9
)
1.8
0.0018
E12.5 retina
AGGGCATAAA (
3
)
73.2
0.0732
E12.5 retina
GAGGCTGCAG
(
3
)
24.4
0.0244
E12.5 retina
TTAATATTTA (
3
)
7.5
0.0075
E12.5 retina
GTTCCCTTTC
(
2
)
1.9
0.0019
E12.5 retina
TTCCTTCAGT
(
4
)
1.9
0.0019
E12.5 retina
TTGGGATGGT
(
2
)
1.9
0.0019
E14.5 retina
TTAATATTTA (
3
)
25.5
0.0255
E14.5 retina
GAGGCTGCAG
(
3
)
23.7
0.0237
E14.5 retina
AGGGCATAAA (
3
)
16.4
0.0164
E14.5 retina
TTGGGATGGT
(
2
)
7.3
0.0073
E14.5 retina
GGGCTGGAGA (
8
)
1.8
0.0018
E14.5 retina
TTCCTTCAGT
(
4
)
1.8
0.0018
E14.5 retina
TTTATGTTTT (
6
)
1.8
0.0018
E16.5 retina
GAGGCTGCAG
(
3
)
25.4
0.0254
E16.5 retina
TTAATATTTA (
3
)
12.7
0.0127
E16.5 retina
TTCCTTCAGT
(
4
)
12.7
0.0127
E16.5 retina
TTGGGATGGT
(
2
)
3.6
0.0036
E16.5 retina
AGGGCATAAA (
3
)
1.8
0.0018
E18.5 retina
GAGGCTGCAG
(
3
)
29.1
0.0291
E18.5 retina
TTAATATTTA (
3
)
23.6
0.0236
E18.5 retina
TTGGGATGGT
(
2
)
7.3
0.0073
E18.5 retina
GTTCCCTTTC
(
2
)
1.8
0.0018
P0.5 retina
GAGGCTGCAG
(
3
)
11.8
0.0118
P0.5 retina
TTGGGATGGT
(
2
)
5.9
0.0059
P0.5 retina
TTAATATTTA (
3
)
3.9
0.0039
P0.5 retina
GGAATTGGAG (
3
)
2
0.002
P0.5 retina
GGGCTGGAGA (
8
)
2
0.002
P0.5 retina
TTATGAAGTG
(
2
)
2
0.002
P0.5 retina
TTCCTTCAGT
(
4
)
2
0.002
P0.5 retina
TTTATGTTTT (
6
)
2
0.002
P2.5 retina
GAGGCTGCAG
(
3
)
17.6
0.0176
P2.5 retina
TTAATATTTA (
3
)
14.1
0.0141
P2.5 retina
TTCCTTCAGT
(
4
)
1.8
0.0018
P2.5 retina
TTGGGATGGT
(
2
)
1.8
0.0018
P4.5 retina
GAGGCTGCAG
(
3
)
35.7
0.0357
P4.5 retina
TTAATATTTA (
3
)
7.9
0.0079
P4.5 retina
TTCCTTCAGT
(
4
)
4
0.004
P4.5 retina
AGAATGGAGA (
9
)
2
0.002
P4.5 retina
GGGCTGGAGA (
8
)
2
0.002
P4.5 retina
TTATGAAGTG
(
2
)
2
0.002
P4.5 retina
TTGGGATGGT
(
2
)
2
0.002
P4.5 retina
TTTCCTTCCA (
5
)
2
0.002
P6.5 retina
TTAATATTTA (
3
)
23.3
0.0233
P6.5 retina
GAGGCTGCAG
(
3
)
13.3
0.0133
P6.5 retina
AGGGCATAAA (
3
)
3.3
0.0033
P6.5 retina
GTTCCCTTTC
(
2
)
1.7
0.0017
P6.5 retina
TTCCTTCAGT
(
4
)
1.7
0.0017
P6.5 retina
TTGGGATGGT
(
2
)
1.7
0.0017
P10.5 crx- retina
GAGGCTGCAG
(
3
)
13
0.013
P10.5 crx- retina
TTAATATTTA (
3
)
13
0.013
P10.5 crx- retina
GGAATTGGAG (
3
)
1.9
0.0019
P10.5 crx- retina
TTGGGATGGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
GAGGCTGCAG
(
3
)
13.5
0.0135
P10.5 crx+ retina
TTAATATTTA (
3
)
9.6
0.0096
P10.5 crx+ retina
TTGGGATGGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
TTTCCTTCCA (
5
)
1.9
0.0019
Adult retinal
GAGGCTGCAG
(
3
)
9.3
0.0093
Adult retinal
GGGCTGGAGA (
8
)
5.6
0.0056
Adult retinal
TTAATATTTA (
3
)
3.7
0.0037
Adult retinal
TTCCTTCAGT
(
4
)
3.7
0.0037
ONL
TTAATATTTA (
3
)
17.2
0.0172
ONL
GAGGCTGCAG
(
3
)
1.9
0.0019
ONL
GGGCTGGAGA (
8
)
1.9
0.0019
ONL
GTTCCCTTTC
(
2
)
1.9
0.0019
ONL
TTGGGATGGT
(
2
)
1.9
0.0019
