Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20929	Herc2	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2	7	7 27.0 cM	15204
Human Homolog	HERC2[hect domain and RLD 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTCACAAAA (2) 6.5 0.0065 P8 Cb GC CTTCTTTCTG (6) 1.6 0.0016 Cb medulloblastoma TGTCACAAAA (2) 20.8 0.0208 Cb medulloblastoma CTTCTTTCTG (6) 4.6 0.0046 Cb medulloblastoma GCAGATTCAG (3) 2.3 0.0023 Cb medulloblastoma TGCTCTGCCT (20) 2.3 0.0023 P8 GC+1d culture TGCTCTGCCT (20) 10.3 0.0103 P8 GC+1d culture TGTCACAAAA (2) 9.1 0.0091 P8 GC+1d culture CTTCTTTCTG (6) 6.8 0.0068 P8 GC+1d culture AAGAACTCAC (3) 1.1 0.0011 P8 GC+1d culture GCAGATTCAG (3) 1.1 0.0011 P8 GC+SHH+1d culture TGCTCTGCCT (20) 9.4 0.0094 P8 GC+SHH+1d culture CTTCTTTCTG (6) 5.9 0.0059 P8 GC+SHH+1d culture TGTCACAAAA (2) 5.9 0.0059 P8 GC+SHH+1d culture GCAGATTCAG (3) 2.3 0.0023 P8 GC+SHH+1d culture AAGAACTCAC (3) 1.2 0.0012 3T3 fibroblasts GACCTGGTGA (2) 7 0.007 3T3 fibroblasts CTTCTTTCTG (6) 3.5 0.0035 3T3 fibroblasts TGCTCTGCCT (20) 3.5 0.0035 E15 cortex GCAGATTCAG (3) 4.9 0.0049 E15 cortex TGCTCTGCCT (20) 4.9 0.0049 P1 cortex TGCTCTGCCT (20) 22.7 0.0227 P1 cortex CTTCTTTCTG (6) 9.1 0.0091 P1 cortex GCAGATTCAG (3) 9.1 0.0091 Hypothalamus CTTCTTTCTG (6) 9.1 0.0091 Hypothalamus TGTCACAAAA (2) 9.1 0.0091 Hypothalamus TGCTCTGCCT (20) 7.2 0.0072 Hypothalamus GCAGATTCAG (3) 1.8 0.0018 E12.5 retina TGTCACAAAA (2) 3.8 0.0038 E12.5 retina AAGAACTCAC (3) 1.9 0.0019 E12.5 retina GCAGATTCAG (3) 1.9 0.0019 E12.5 retina TGCTCTGCCT (20) 1.9 0.0019 E14.5 retina TGTCACAAAA (2) 5.5 0.0055 E14.5 retina AAGGGTGTGG (5) 1.8 0.0018 E14.5 retina TGCTCTGCCT (20) 1.8 0.0018 E16.5 retina TGTCACAAAA (2) 7.2 0.0072 E16.5 retina TGCTCTGCCT (20) 3.6 0.0036 E18.5 retina TGTCACAAAA (2) 9.1 0.0091 E18.5 retina TGCTCTGCCT (20) 5.5 0.0055 E18.5 retina CTTCTTTCTG (6) 1.8 0.0018 P0.5 retina TGCTCTGCCT (20) 3.9 0.0039 P0.5 retina TGTCACAAAA (2) 3.9 0.0039 P0.5 retina CTTCTTTCTG (6) 2 0.002 P0.5 retina GACCTGGTGA (2) 2 0.002 P0.5 retina GCAGATTCAG (3) 2 0.002 P2.5 retina TGCTCTGCCT (20) 10.6 0.0106 P2.5 retina TGTCACAAAA (2) 5.3 0.0053 P2.5 retina AAGAACTCAC (3) 1.8 0.0018 P2.5 retina CTTCTTTCTG (6) 1.8 0.0018 P2.5 retina GCAGATTCAG (3) 1.8 0.0018 P4.5 retina TGCTCTGCCT (20) 9.9 0.0099 P4.5 retina TGTCACAAAA (2) 4 0.004 P4.5 retina CTTCTTTCTG (6) 2 0.002 P6.5 retina CTTCTTTCTG (6) 10 0.01 P6.5 retina TGTCACAAAA (2) 5 0.005 P6.5 retina TGCTCTGCCT (20) 3.3 0.0033 P6.5 retina GCAGATTCAG (3) 1.7 0.0017 P10.5 crx- retina CTTCTTTCTG (6) 5.6 0.0056 P10.5 crx- retina GCAGATTCAG (3) 3.7 0.0037 P10.5 crx- retina TGCTCTGCCT (20) 3.7 0.0037 P10.5 crx- retina TGTCACAAAA (2) 3.7 0.0037 P10.5 crx- retina AAGAACTCAC (3) 1.9 0.0019 P10.5 crx+ retina TGCTCTGCCT (20) 23.1 0.0231 P10.5 crx+ retina CTTCTTTCTG (6) 9.6 0.0096 P10.5 crx+ retina TGTCACAAAA (2) 3.8 0.0038 Adult retinal TGCTCTGCCT (20) 16.7 0.0167 Adult retinal CTTCTTTCTG (6) 11.1 0.0111 Adult retinal TGTCACAAAA (2) 9.3 0.0093 Adult retinal GCAGATTCAG (3) 1.9 0.0019 ONL TGTCACAAAA (2) 3.8 0.0038 ONL CTTCTTTCTG (6) 1.9 0.0019