Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20929	Herc2	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2	7	7 27.0 cM	15204
Human Homolog	HERC2[hect domain and RLD 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTCTTTCTG (3) TGTCACAAAA 8.1 0.0081 Cb medulloblastoma CTTCTTTCTG (3) GCAGATTCAG TGCTCTGCCT (2) TGTCACAAAA 30 0.03 P8 GC+1d culture AAGAACTCAC CTTCTTTCTG (3) GCAGATTCAG TGCTCTGCCT (2) TGTCACAAAA 28.4 0.0284 P8 GC+SHH+1d culture AAGAACTCAC CTTCTTTCTG (3) GCAGATTCAG TGCTCTGCCT (2) TGTCACAAAA 24.7 0.0247 3T3 fibroblasts CTTCTTTCTG (3) GACCTGGTGA (2) TGCTCTGCCT (2) 14 0.014 E15 cortex GCAGATTCAG TGCTCTGCCT (2) 9.8 0.0098 P1 cortex CTTCTTTCTG (3) GCAGATTCAG TGCTCTGCCT (2) 40.9 0.0409 Hypothalamus CTTCTTTCTG (3) GCAGATTCAG TGCTCTGCCT (2) TGTCACAAAA 27.2 0.0272 E12.5 retina AAGAACTCAC GCAGATTCAG TGCTCTGCCT (2) TGTCACAAAA 9.5 0.0095 E14.5 retina AAGGGTGTGG (2) TGCTCTGCCT (2) TGTCACAAAA 9.1 0.0091 E16.5 retina TGCTCTGCCT (2) TGTCACAAAA 10.8 0.0108 E18.5 retina CTTCTTTCTG (3) TGCTCTGCCT (2) TGTCACAAAA 16.4 0.0164 P0.5 retina CTTCTTTCTG (3) GACCTGGTGA (2) GCAGATTCAG TGCTCTGCCT (2) TGTCACAAAA 13.8 0.0138 P2.5 retina AAGAACTCAC CTTCTTTCTG (3) GCAGATTCAG TGCTCTGCCT (2) TGTCACAAAA 21.3 0.0213 P4.5 retina CTTCTTTCTG (3) TGCTCTGCCT (2) TGTCACAAAA 15.9 0.0159 P6.5 retina CTTCTTTCTG (3) GCAGATTCAG TGCTCTGCCT (2) TGTCACAAAA 20 0.02 P10.5 crx- retina AAGAACTCAC CTTCTTTCTG (3) GCAGATTCAG TGCTCTGCCT (2) TGTCACAAAA 18.6 0.0186 P10.5 crx+ retina CTTCTTTCTG (3) TGCTCTGCCT (2) TGTCACAAAA 36.5 0.0365 Adult retinal CTTCTTTCTG (3) GCAGATTCAG TGCTCTGCCT (2) TGTCACAAAA 39 0.039 ONL CTTCTTTCTG (3) TGTCACAAAA 5.7 0.0057