Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20935	Ilf3	interleukin enhancer binding factor 3	9	9 A4-A5 (9 4.0 cM)	16201
Gene Ontology	DNA binding | double-stranded RNA binding | intracellular | nucleus | protein binding | regulation of transcription, DNA-dependent | RNA binding
Human Homolog	ILF3[interleukin enhancer binding factor 3, 90kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACGCCCTA 3.3 0.0033 P8 Cb GC ATTTTGGGGG (4) 3.3 0.0033 P8 Cb GC GGGGGCCCAG (10) 3.3 0.0033 P8 Cb GC GCTGCACCAG (3) 1.6 0.0016 P8 Cb GC TATTCATTTA (2) 1.6 0.0016 P8 Cb GC TTAAAGTAAT 1.6 0.0016 Cb medulloblastoma GGGGGCCCAG (10) 13.9 0.0139 Cb medulloblastoma ATTTTGGGGG (4) 6.9 0.0069 Cb medulloblastoma TTCACTGGGC 2.3 0.0023 P8 GC+1d culture GGGGGCCCAG (10) 14.8 0.0148 P8 GC+1d culture ATTTTGGGGG (4) 4.6 0.0046 P8 GC+1d culture TTAAAGTAAA (3) 3.4 0.0034 P8 GC+1d culture GCTGCACCAG (3) 2.3 0.0023 P8 GC+1d culture TCTTCTCCAC (6) 2.3 0.0023 P8 GC+1d culture TTAAAGTAAT 1.1 0.0011 P8 GC+1d culture TTCACTGGGC 1.1 0.0011 P8 GC+SHH+1d culture GGGGGCCCAG (10) 12.9 0.0129 P8 GC+SHH+1d culture TTAAAGTAAT 7 0.007 P8 GC+SHH+1d culture ATTTTGGGGG (4) 5.9 0.0059 P8 GC+SHH+1d culture TCTTCTCCAC (6) 3.5 0.0035 P8 GC+SHH+1d culture TATTCATTTA (2) 2.3 0.0023 P8 GC+SHH+1d culture GCTGCACCAG (3) 1.2 0.0012 P8 GC+SHH+1d culture TTAAAGTAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTCACTGGGC 1.2 0.0012 3T3 fibroblasts GGGGGCCCAG (10) 101.6 0.1016 3T3 fibroblasts ATTTTGGGGG (4) 7 0.007 3T3 fibroblasts TTAAAGTAAT 3.5 0.0035 E15 cortex ATTTTGGGGG (4) 19.8 0.0198 E15 cortex TTCACTGGGC 14.8 0.0148 E15 cortex AAACGCCCTA 9.9 0.0099 E15 cortex GCTGCACCAG (3) 4.9 0.0049 E15 cortex GGGGGCCCAG (10) 4.9 0.0049 P1 cortex ATTTTGGGGG (4) 27.3 0.0273 P1 cortex GGGGGCCCAG (10) 4.5 0.0045 P1 cortex TATTCATTTA (2) 4.5 0.0045 P1 cortex TTCACTGGGC 4.5 0.0045 P1 cortex TTCTTGGGGG (5) 4.5 0.0045 Hypothalamus GGGGGCCCAG (10) 9.1 0.0091 Hypothalamus TCTTCTCCAC (6) 7.2 0.0072 Hypothalamus ATTTTGGGGG (4) 1.8 0.0018 Hypothalamus GAGGCTATGG (2) 1.8 0.0018 E12.5 retina ATTTTGGGGG (4) 9.4 0.0094 E12.5 retina GGGGGCCCAG (10) 7.5 0.0075 E12.5 retina GCTGCACCAG (3) 3.8 0.0038 E12.5 retina GGCAGGGCAG (4) 1.9 0.0019 E12.5 retina TTCACTGGGC 1.9 0.0019 E14.5 retina ATTTTGGGGG (4) 3.6 0.0036 E14.5 retina AAACGCCCTA 1.8 0.0018 E14.5 retina GAGGCTATGG (2) 1.8 0.0018 E14.5 retina GCTGCACCAG (3) 1.8 0.0018 E14.5 retina TTAAAGTAAT 1.8 0.0018 E16.5 retina ATTTTGGGGG (4) 3.6 0.0036 E16.5 retina GCTGCACCAG (3) 3.6 0.0036 E16.5 retina GGGGGCCCAG (10) 3.6 0.0036 E16.5 retina TATTCATTTA (2) 3.6 0.0036 E16.5 retina TTAAAGTAAT 1.8 0.0018 E18.5 retina TTAAAGTAAT 5.5 0.0055 E18.5 retina GGGGGCCCAG (10) 3.6 0.0036 E18.5 retina GCTGCACCAG (3) 1.8 0.0018 E18.5 retina GGCAGGGCAG (4) 1.8 0.0018 E18.5 retina TTCTTGGGGG (5) 1.8 0.0018 P0.5 retina GGGGGCCCAG (10) 21.6 0.0216 P0.5 retina ATTTTGGGGG (4) 9.8 0.0098 P0.5 retina GCTGCACCAG (3) 2 0.002 P0.5 retina TCTTCTCCAC (6) 2 0.002 P0.5 retina TTAAAGTAAT 2 0.002 P0.5 retina TTCACTGGGC 2 0.002 P2.5 retina GGGGGCCCAG (10) 15.8 0.0158 P2.5 retina ATTTTGGGGG (4) 3.5 0.0035 P2.5 retina TATTCATTTA (2) 3.5 0.0035 P2.5 retina AAACGCCCTA 1.8 0.0018 P2.5 retina TTAAAGTAAA (3) 1.8 0.0018 P2.5 retina TTAAAGTAAT 1.8 0.0018 P2.5 retina TTCACTGGGC 1.8 0.0018 P4.5 retina GGGGGCCCAG (10) 15.9 0.0159 P4.5 retina ATTTTGGGGG (4) 5.9 0.0059 P4.5 retina GCTGCACCAG (3) 2 0.002 P4.5 retina TATTCATTTA (2) 2 0.002 P4.5 retina TTAAAGTAAA (3) 2 0.002 P4.5 retina TTAAAGTAAT 2 0.002 P6.5 retina GGGGGCCCAG (10) 16.7 0.0167 P6.5 retina GCTGCACCAG (3) 8.3 0.0083 P6.5 retina ATTTTGGGGG (4) 3.3 0.0033 P6.5 retina TTCACTGGGC 3.3 0.0033 P6.5 retina TCTTCTCCAC (6) 1.7 0.0017 P10.5 crx- retina ATTTTGGGGG (4) 18.6 0.0186 P10.5 crx- retina GGGGGCCCAG (10) 5.6 0.0056 P10.5 crx- retina GCTGCACCAG (3) 3.7 0.0037 P10.5 crx- retina GAGGCTATGG (2) 1.9 0.0019 P10.5 crx- retina TATTCATTTA (2) 1.9 0.0019 P10.5 crx- retina TTCACTGGGC 1.9 0.0019 P10.5 crx+ retina GGGGGCCCAG (10) 15.4 0.0154 P10.5 crx+ retina ATTTTGGGGG (4) 5.8 0.0058 P10.5 crx+ retina GCTGCACCAG (3) 3.8 0.0038 Adult retinal GGGGGCCCAG (10) 16.7 0.0167 Adult retinal ATTTTGGGGG (4) 3.7 0.0037 Adult retinal TCTTCTCCAC (6) 3.7 0.0037 Adult retinal GGCAGGGCAG (4) 1.9 0.0019 Adult retinal TTCACTGGGC 1.9 0.0019 Adult retinal TTCTTGGGGG (5) 1.9 0.0019 ONL ATTTTGGGGG (4) 1.9 0.0019 ONL GGGGGCCCAG (10) 1.9 0.0019 ONL TTCACTGGGC 1.9 0.0019 ONL TTCTTGGGGG (5) 1.9 0.0019