Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20935	Ilf3	interleukin enhancer binding factor 3	9	9 A4-A5 (9 4.0 cM)	16201
Gene Ontology	DNA binding | double-stranded RNA binding | intracellular | nucleus | protein binding | regulation of transcription, DNA-dependent | RNA binding
Human Homolog	ILF3[interleukin enhancer binding factor 3, 90kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACGCCCTA ATTTTGGGGG GCTGCACCAG GGGGGCCCAG (3) TATTCATTTA (2) TTAAAGTAAT 14.7 0.0147 Cb medulloblastoma ATTTTGGGGG GGGGGCCCAG (3) TTCACTGGGC 23.1 0.0231 P8 GC+1d culture ATTTTGGGGG GCTGCACCAG GGGGGCCCAG (3) TCTTCTCCAC (2) TTAAAGTAAA TTAAAGTAAT TTCACTGGGC 29.6 0.0296 P8 GC+SHH+1d culture ATTTTGGGGG GCTGCACCAG GGGGGCCCAG (3) TATTCATTTA (2) TCTTCTCCAC (2) TTAAAGTAAA TTAAAGTAAT TTCACTGGGC 35.2 0.0352 3T3 fibroblasts ATTTTGGGGG GGGGGCCCAG (3) TTAAAGTAAT 112.1 0.1121 E15 cortex AAACGCCCTA ATTTTGGGGG GCTGCACCAG GGGGGCCCAG (3) TTCACTGGGC 54.3 0.0543 P1 cortex ATTTTGGGGG GGGGGCCCAG (3) TATTCATTTA (2) TTCACTGGGC TTCTTGGGGG 45.3 0.0453 Hypothalamus ATTTTGGGGG GAGGCTATGG GGGGGCCCAG (3) TCTTCTCCAC (2) 19.9 0.0199 E12.5 retina ATTTTGGGGG GCTGCACCAG GGCAGGGCAG (2) GGGGGCCCAG (3) TTCACTGGGC 24.5 0.0245 E14.5 retina AAACGCCCTA ATTTTGGGGG GAGGCTATGG GCTGCACCAG TTAAAGTAAT 10.8 0.0108 E16.5 retina ATTTTGGGGG GCTGCACCAG GGGGGCCCAG (3) TATTCATTTA (2) TTAAAGTAAT 16.2 0.0162 E18.5 retina GCTGCACCAG GGCAGGGCAG (2) GGGGGCCCAG (3) TTAAAGTAAT TTCTTGGGGG 14.5 0.0145 P0.5 retina ATTTTGGGGG GCTGCACCAG GGGGGCCCAG (3) TCTTCTCCAC (2) TTAAAGTAAT TTCACTGGGC 39.4 0.0394 P2.5 retina AAACGCCCTA ATTTTGGGGG GGGGGCCCAG (3) TATTCATTTA (2) TTAAAGTAAA TTAAAGTAAT TTCACTGGGC 30 0.03 P4.5 retina ATTTTGGGGG GCTGCACCAG GGGGGCCCAG (3) TATTCATTTA (2) TTAAAGTAAA TTAAAGTAAT 29.8 0.0298 P6.5 retina ATTTTGGGGG GCTGCACCAG GGGGGCCCAG (3) TCTTCTCCAC (2) TTCACTGGGC 33.3 0.0333 P10.5 crx- retina ATTTTGGGGG GAGGCTATGG GCTGCACCAG GGGGGCCCAG (3) TATTCATTTA (2) TTCACTGGGC 33.6 0.0336 P10.5 crx+ retina ATTTTGGGGG GCTGCACCAG GGGGGCCCAG (3) 25 0.025 Adult retinal ATTTTGGGGG GGCAGGGCAG (2) GGGGGCCCAG (3) TCTTCTCCAC (2) TTCACTGGGC TTCTTGGGGG 29.8 0.0298 ONL ATTTTGGGGG GGGGGCCCAG (3) TTCACTGGGC TTCTTGGGGG 7.6 0.0076