Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.212763	2210412K09Rik	RIKEN cDNA 2210412K09 gene	4		76959
Gene Ontology	biological_process unknown | molecular_function unknown | nucleus
Human Homolog	SNF7DC2[SNF7 domain containing 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTCCCTCAG 11.4 0.0114 P8 Cb GC ACAAAAAAAA (31) 6.5 0.0065 P8 Cb GC AAGTTGGGAG (4) 1.6 0.0016 P8 Cb GC GGGTGGGGGA (14) 1.6 0.0016 Cb medulloblastoma ACAAAAAAAA (31) 34.7 0.0347 Cb medulloblastoma GTTCCCTCAG 9.2 0.0092 P8 GC+1d culture GTTCCCTCAG 13.7 0.0137 P8 GC+1d culture ACAAAAAAAA (31) 5.7 0.0057 P8 GC+1d culture AAGTTGGGAG (4) 2.3 0.0023 P8 GC+1d culture ACTTAAACCC 2.3 0.0023 P8 GC+SHH+1d culture ACAAAAAAAA (31) 14.1 0.0141 P8 GC+SHH+1d culture GTTCCCTCAG 9.4 0.0094 P8 GC+SHH+1d culture AAGTTGGGAG (4) 1.2 0.0012 P8 GC+SHH+1d culture GGGTGGGGGA (14) 1.2 0.0012 3T3 fibroblasts GTTCCCTCAG 7 0.007 E15 cortex ACAAAAAAAA (31) 4.9 0.0049 E15 cortex GTTCCCTCAG 4.9 0.0049 P1 cortex ACAAAAAAAA (31) 4.5 0.0045 P1 cortex GGGTGGGGGA (14) 4.5 0.0045 Hypothalamus GTTCCCTCAG 12.7 0.0127 Hypothalamus ACAAAAAAAA (31) 10.9 0.0109 Hypothalamus GGGTGGGGGA (14) 9.1 0.0091 Hypothalamus ACTTAAACCC 1.8 0.0018 Hypothalamus GTCAAACAGA (4) 1.8 0.0018 E12.5 retina GTTCCCTCAG 7.5 0.0075 E12.5 retina ACAAAAAAAA (31) 1.9 0.0019 E12.5 retina ACTTAAACCC 1.9 0.0019 E12.5 retina GGGTGGGGGA (14) 1.9 0.0019 E14.5 retina ACAAAAAAAA (31) 5.5 0.0055 E14.5 retina GTTCCCTCAG 5.5 0.0055 E14.5 retina AAGTTGGGAG (4) 3.6 0.0036 E16.5 retina GTTCCCTCAG 18.1 0.0181 E16.5 retina ACAAAAAAAA (31) 1.8 0.0018 E18.5 retina ACAAAAAAAA (31) 14.6 0.0146 E18.5 retina GTTCCCTCAG 10.9 0.0109 E18.5 retina GGGTGGGGGA (14) 1.8 0.0018 P0.5 retina GTTCCCTCAG 9.8 0.0098 P0.5 retina ACAAAAAAAA (31) 5.9 0.0059 P2.5 retina ACAAAAAAAA (31) 5.3 0.0053 P2.5 retina GTTCCCTCAG 3.5 0.0035 P2.5 retina AAGTTGGGAG (4) 1.8 0.0018 P2.5 retina ACTTAAACCC 1.8 0.0018 P2.5 retina GTCAAACAGA (4) 1.8 0.0018 P4.5 retina GTTCCCTCAG 21.8 0.0218 P4.5 retina AAGTTGGGAG (4) 5.9 0.0059 P4.5 retina ACAAAAAAAA (31) 5.9 0.0059 P4.5 retina AAATGGAAAA (8) 2 0.002 P4.5 retina GGGTGGGGGA (14) 2 0.002 P6.5 retina GTTCCCTCAG 5 0.005 P6.5 retina GGGTGGGGGA (14) 3.3 0.0033 P6.5 retina ACAAAAAAAA (31) 1.7 0.0017 P10.5 crx- retina GTTCCCTCAG 16.7 0.0167 P10.5 crx- retina GGGTGGGGGA (14) 5.6 0.0056 P10.5 crx- retina ACAAAAAAAA (31) 1.9 0.0019 P10.5 crx+ retina GTTCCCTCAG 15.4 0.0154 P10.5 crx+ retina ACAAAAAAAA (31) 11.5 0.0115 P10.5 crx+ retina GGGTGGGGGA (14) 1.9 0.0019 P10.5 crx+ retina GTCAAACAGA (4) 1.9 0.0019 Adult retinal GTTCCCTCAG 7.4 0.0074 Adult retinal GGGTGGGGGA (14) 3.7 0.0037 Adult retinal AAGTTGGGAG (4) 1.9 0.0019 ONL GTTCCCTCAG 17.2 0.0172 ONL ACAAAAAAAA (31) 5.7 0.0057 ONL AAATGGAAAA (8) 3.8 0.0038