Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21874	Psmb3	proteasome (prosome, macropain) subunit, beta type 3	11	11 58.3 cM	26446
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | protein catabolism | ubiquitin-dependent protein catabolism
Human Homolog	PSMB3[proteasome (prosome, macropain) subunit, beta type, 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 164 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAAAAAAAA (3) GACTGATAAA GGCGTCATCG (3) GGGATGCTCT (3) GGGGTTTTTA GTGGGGAGCC TAGGCAAAAC (2) TGGGTGCTGG (2) 119.1 0.1191 Cb medulloblastoma CCAAAAAAAA (3) GACTGATAAA GCCTAAAAAA GGCGTCATCG (3) GGCTTTATTT GTGGGGAGCC TAGGCAAAAC (2) TGGGTGCTGG (2) 150.2 0.1502 P8 GC+1d culture CCAAAAAAAA (3) GACTGATAAA GGCGTCATCG (3) GGCTTCATTT GGGATGCTCT (3) GGTGTCATCA (2) GTGGGGAGCC TAGGCAAAAC (2) TGGGTGCTGG (2) 93.4 0.0934 P8 GC+SHH+1d culture AACTCATTTG (2) CCAAAAAAAA (3) GACTGATAAA GGCGTCATCG (3) GGGATGCTCT (3) GTGACTGATG (2) GTGGGGAGCC TGGGTGCTGG (2) TTGGGCTCCC 92.5 0.0925 3T3 fibroblasts GGCGTCATCG (3) GGGATGCTCT (3) GTGACTGATG (2) TGGGTGCTGG (2) 66.6 0.0666 E15 cortex AAGGGAAAAA CCAAAAAAAA (3) GACTGATAAA GGCGTCATCG (3) GGGATGCTCT (3) GGGGTCATCG GTGGGGAGCC TGGGTGCTGG (2) 118.6 0.1186 P1 cortex CCAAAAAAAA (3) GACTGATAAA GGCGTCATCG (3) GGGATGCTCT (3) GTGACTGATG (2) TGGGTGCTGG (2) 90.8 0.0908 Hypothalamus CCAAAAAAAA (3) GGCGTCATCG (3) GGCTTTATTT TAGGCAAAAC (2) TGGGTGCTGG (2) 67 0.067 E12.5 retina AGGAAGGGGG (2) CCAAAAAAAA (3) GCCTAAAAAA GCGGCCCACC GGCGTCATCG (3) GTGACTGATG (2) GTGGGGAGCC TAGGCAAAAC (2) TGGGTGCTGG (2) TTGGGCTCCC 67.8 0.0678 E14.5 retina CCAAAAAAAA (3) GACTGATAAA GGCGTCATCG (3) GGGGTTTTTA TAGGCAAAAC (2) TGGGTGCTGG (2) TTGGGCTCCC 96.6 0.0966 E16.5 retina AACTCATTTG (2) CCAAAAAAAA (3) GGCGTCATCG (3) GGCTTTATTT GGGATGCTCT (3) GTGACTGATG (2) GTGGGGAGCC TAGGCAAAAC (2) TGGGTGCTGG (2) 92.3 0.0923 E18.5 retina AGGAAGGGGG (2) CCAAAAAAAA (3) GACTGATAAA GCCTAAAAAA GCGGCCCACC GGCATTTTTT GGCGTCATCG (3) GGGATGCTCT (3) GGTGTCATCA (2) GTGGGGAGCC TAGGCAAAAC (2) TGGGTGCTGG (2) TTGGGCTCCC 109.1 0.1091 P0.5 retina AACTCATTTG (2) CCAAAAAAAA (3) GGCGTCATCG (3) GGGATGCTCT (3) GGGGTTTTTA GTGGGGAGCC TAGGCAAAAC (2) TGGGTGCTGG (2) 98.2 0.0982 P2.5 retina AGGAAGGGGG (2) CCAAAAAAAA (3) GACTGATAAA GGCGTCATCG (3) GGGATGCTCT (3) GTGGGGAGCC TAGGCAAAAC (2) TGGGTGCTGG (2) 95.1 0.0951 P4.5 retina AGGAAGGGGG (2) CCAAAAAAAA (3) GACTGATAAA GGCGTCATCG (3) GGCTTTATTT GGGATGCTCT (3) GGGGTCATCG GTGGGGAGCC TAGGCAAAAC (2) TGGGTGCTGG (2) TTGGGCTCCC 101.2 0.1012 P6.5 retina AACTCATTTG (2) CCAAAAAAAA (3) GACTGATAAA GCGGCCCACC GGCGTCATCG (3) GGCTTCTTCT (2) GGGATGCTCT (3) GGGGTCATCG GGTGTCATCA (2) GTGGGGAGCC TAGGCAAAAC (2) TGGGTGCTGG (2) TTGGGCTCCC 95.1 0.0951 P10.5 crx- retina AACTCATTTG (2) AAGGGAAAAA AGGAAGGGGG (2) CCAAAAAAAA (3) GGCGTCATCG (3) GGCTTTATTT TGGGTGCTGG (2) TTGGGCTCCC 98.6 0.0986 P10.5 crx+ retina AAGGGAAAAA AGGAAGGGGG (2) CCAAAAAAAA (3) GGCGTCATCG (3) GGGATGCTCT (3) GGGGTCATCG TAGGCAAAAC (2) TGGGTGCTGG (2) TTGGGCTCCC 105.6 0.1056 Adult retinal CCAAAAAAAA (3) GGCGTCATCG (3) GGCTTCATTT TAGGCAAAAC (2) TGGGTGCTGG (2) 66.8 0.0668 ONL CCAAAAAAAA (3) GCGGCCCACC GGCGTCATCG (3) GGCTTCATTT TAGGCAAAAC (2) TGGGTGCTGG (2) 70.9 0.0709