Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21961	Atp6ap1	ATPase, H+ transporting, lysosomal accessory protein 1	X	X 29.83 cM	54411
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | extracellular space | hydrogen ion transporter activity | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | integral to membrane | proton transport | proton-transporting two-sector ATPase complex
Human Homolog	ATP6AP1[ATPase, H+ transporting, lysosomal accessory protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTTGAGGT 3.3 0.0033 Cb medulloblastoma GCTGTTGCTG (2) GTGGCTGGGG 4.6 0.0046 P8 GC+1d culture AACTTGAGGT 3.4 0.0034 3T3 fibroblasts AACTTGAGGT 7 0.007 P1 cortex AACTTGAGGT TGGTTGTCTC 13.6 0.0136 Hypothalamus AACTTGAGGT GAACGACTTG 3.6 0.0036 E12.5 retina GAGCTGGGTC (2) 1.9 0.0019 E14.5 retina GGTGGGCCTG 1.8 0.0018 E18.5 retina AACTTGAGGT GAGCTGGGTC (2) GGTGGGCCTG 5.4 0.0054 P0.5 retina TGGTTGTCTC 2 0.002 P2.5 retina AACTTGAGGT GGTGGGCCTG TGGTTGTCTC 5.4 0.0054 P6.5 retina AACTTGAGGT GAGCTGGGTC (2) GCTGTTGCTG (2) TGGTTGTCTC 13.3 0.0133 P10.5 crx- retina AACTTGAGGT GCTGTTGCTG (2) GTGGCTGGGG 9.4 0.0094 P10.5 crx+ retina AACTTGAGGT GAGCTGGGTC (2) GTGGCTGGGG 7.6 0.0076 Adult retinal AACTTGAGGT GAACGACTTG GCTGTTGCTG (2) TGGTTGTCTC 11.3 0.0113 ONL AACTTGAGGT 7.7 0.0077