Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.219793	Ssrp1	structure specific recognition protein 1	2	2 47.8 cM	20833
Gene Ontology	chromatin | DNA binding | nucleus | regulation of transcription, DNA-dependent
Human Homolog	SSRP1[structure specific recognition protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAAGTCAGG 13.1 0.0131 P8 Cb GC AAAGAGTATG 1.6 0.0016 Cb medulloblastoma CCAAGTCAGG 6.9 0.0069 Cb medulloblastoma AAAGAGTATG 2.3 0.0023 P8 GC+1d culture CCAAGTCAGG 10.3 0.0103 P8 GC+1d culture GCAGAGACAT 3.4 0.0034 P8 GC+SHH+1d culture CCAAGTCAGG 11.7 0.0117 P8 GC+SHH+1d culture GCAGAGACAT 2.3 0.0023 P8 GC+SHH+1d culture CCAAAGTCAG 1.2 0.0012 3T3 fibroblasts CCAAGTCAGG 17.5 0.0175 3T3 fibroblasts GCAGAGACAT 10.5 0.0105 E15 cortex CCAAGTCAGG 24.7 0.0247 P1 cortex GCAGAGACAT 9.1 0.0091 P1 cortex AAAGAGTATG 4.5 0.0045 P1 cortex CCAAGTCAGG 4.5 0.0045 Hypothalamus ACCCCTTCTG 3.6 0.0036 Hypothalamus CCAAGTCAGG 3.6 0.0036 Hypothalamus GCAGAGACAT 1.8 0.0018 E12.5 retina CCAAGTCAGG 24.4 0.0244 E12.5 retina GCAGAGACAT 13.1 0.0131 E12.5 retina AAAGAGTATG 1.9 0.0019 E14.5 retina GCAGAGACAT 14.6 0.0146 E14.5 retina CCAAGTCAGG 5.5 0.0055 E14.5 retina AAAGAGTATG 1.8 0.0018 E16.5 retina GCAGAGACAT 29 0.029 E16.5 retina CCAAGTCAGG 9.1 0.0091 E18.5 retina CCAAGTCAGG 12.7 0.0127 E18.5 retina AAAGAGTATG 3.6 0.0036 E18.5 retina GCAGAGACAT 1.8 0.0018 P0.5 retina CCAAGTCAGG 29.4 0.0294 P0.5 retina AAAGAGTATG 9.8 0.0098 P2.5 retina CCAAGTCAGG 7 0.007 P2.5 retina CCAAAGTCAG 1.8 0.0018 P4.5 retina CCAAGTCAGG 5.9 0.0059 P6.5 retina CCAAGTCAGG 11.7 0.0117 P6.5 retina AAAAGCACTT 1.7 0.0017 P10.5 crx- retina CCAAGTCAGG 5.6 0.0056 P10.5 crx- retina AAAAGCACTT 1.9 0.0019 P10.5 crx- retina CCAAAGTCAG 1.9 0.0019 P10.5 crx- retina GCAGAGACAT 1.9 0.0019 P10.5 crx+ retina CCAAGTCAGG 11.5 0.0115 P10.5 crx+ retina GCAGAGACAT 3.8 0.0038 P10.5 crx+ retina ACCCCTTCTG 1.9 0.0019 Adult retinal CCAAGTCAGG 7.4 0.0074 Adult retinal GCAGAGACAT 3.7 0.0037 Adult retinal AAAGAGTATG 1.9 0.0019 ONL CCAAGTCAGG 3.8 0.0038 ONL AAAAGCACTT 1.9 0.0019 ONL AAAGAGTATG 1.9 0.0019